Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 KRT18P34-201ENST00000488218 1270 ntBASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 RNA5SP415-201ENST00000517246 115 ntBASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 AC023824.1-201ENST00000562945 2975 ntBASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 AL078644.1-201ENST00000609881 752 ntBASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA3Q9Y5H8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 AC245100.5-201ENST00000452108 331 ntBASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 AL365330.1-201ENST00000607459 531 ntBASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHA3Q9Y5H8 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 MRPL3P1-201ENST00000400109 1033 ntBASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 AC093909.1-201ENST00000504731 1122 ntBASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 AC023141.13-201ENST00000604991 943 ntBASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHA3Q9Y5H8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms