Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 RN7SL589P-201ENST00000481268 310 ntBASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 MIR3197-201ENST00000582241 73 ntBASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 AC026120.1-201ENST00000611536 926 ntBASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 AL161645.1-201ENST00000622716 1255 ntBASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 DBET-201ENST00000630918 3363 ntBASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 AKAP8P1-201ENST00000434743 1349 ntBASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 AC092919.2-201ENST00000623631 1645 ntBASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 AL355306.1-201ENST00000415580 579 ntBASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PCDHGB6Q9Y5F9 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 AC092384.3-202ENST00000564646 2873 ntBASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 AL353732.1-201ENST00000569618 1459 ntBASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 HCG4-201ENST00000418983 998 ntBASIC15.47■□□□□ 0.07
PCDHGB6Q9Y5F9 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms