Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 AC006449.6-201ENST00000612330 2296 ntBASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 AC079328.2-201ENST00000561241 3354 ntBASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 GPS2P2-201ENST00000430745 888 ntBASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 TSPY16P-201ENST00000449843 468 ntBASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 KLF2P3-201ENST00000451977 1087 ntBASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 TERF1P3-201ENST00000505638 1227 ntBASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 RN7SL204P-201ENST00000582831 262 ntBASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB1Q9Y5F3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 RBPMS2P1-201ENST00000437762 623 ntBASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 AC125807.1-201ENST00000483097 614 ntBASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 AL512356.2-201ENST00000546955 174 ntBASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 RARRES2P8-201ENST00000566335 367 ntBASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms