Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PKP3Q9Y446 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PKP3Q9Y446 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PKP3Q9Y446 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PKP3Q9Y446 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.41■□□□□ 0.22
PKP3Q9Y446 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.41■□□□□ 0.22
PKP3Q9Y446 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PKP3Q9Y446 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.41■□□□□ 0.22
PKP3Q9Y446 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.41■□□□□ 0.22
PKP3Q9Y446 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP3Q9Y446 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
PKP3Q9Y446 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PKP3Q9Y446 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP3Q9Y446 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP3Q9Y446 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP3Q9Y446 CYP2T1P-202ENST00000641596 2535 ntBASIC16.41■□□□□ 0.22
PKP3Q9Y446 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PKP3Q9Y446 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP3Q9Y446 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PKP3Q9Y446 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PKP3Q9Y446 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PKP3Q9Y446 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.4■□□□□ 0.22
PKP3Q9Y446 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PKP3Q9Y446 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.4■□□□□ 0.22
PKP3Q9Y446 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PKP3Q9Y446 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PKP3Q9Y446 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PKP3Q9Y446 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PKP3Q9Y446 MTHFR-217ENST00000641820 1569 ntBASIC16.4■□□□□ 0.22
PKP3Q9Y446 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PKP3Q9Y446 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.4■□□□□ 0.22
PKP3Q9Y446 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.4■□□□□ 0.22
PKP3Q9Y446 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PKP3Q9Y446 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
PKP3Q9Y446 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.4■□□□□ 0.22
PKP3Q9Y446 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.4■□□□□ 0.22
PKP3Q9Y446 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PKP3Q9Y446 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.4■□□□□ 0.22
PKP3Q9Y446 AC079140.1-201ENST00000508039 487 ntBASIC16.4■□□□□ 0.22
PKP3Q9Y446 KRT8P48-201ENST00000515599 1220 ntBASIC16.4■□□□□ 0.22
PKP3Q9Y446 AC105233.2-201ENST00000523697 349 ntBASIC16.4■□□□□ 0.22
PKP3Q9Y446 AF228730.5-201ENST00000530288 346 ntBASIC16.4■□□□□ 0.22
PKP3Q9Y446 AC243562.1-201ENST00000560672 389 ntBASIC16.4■□□□□ 0.22
PKP3Q9Y446 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.4■□□□□ 0.22
PKP3Q9Y446 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.4■□□□□ 0.22
PKP3Q9Y446 AC027307.2-201ENST00000591252 911 ntBASIC16.4■□□□□ 0.22
PKP3Q9Y446 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PKP3Q9Y446 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PKP3Q9Y446 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.4■□□□□ 0.22
PKP3Q9Y446 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PKP3Q9Y446 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PKP3Q9Y446 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PKP3Q9Y446 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.4■□□□□ 0.22
PKP3Q9Y446 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PKP3Q9Y446 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PKP3Q9Y446 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PKP3Q9Y446 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
PKP3Q9Y446 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PKP3Q9Y446 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PKP3Q9Y446 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
PKP3Q9Y446 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PKP3Q9Y446 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PKP3Q9Y446 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PKP3Q9Y446 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PKP3Q9Y446 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PKP3Q9Y446 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
PKP3Q9Y446 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PKP3Q9Y446 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
PKP3Q9Y446 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
PKP3Q9Y446 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PKP3Q9Y446 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PKP3Q9Y446 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.39■□□□□ 0.21
PKP3Q9Y446 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PKP3Q9Y446 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PKP3Q9Y446 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PKP3Q9Y446 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.39■□□□□ 0.21
PKP3Q9Y446 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PKP3Q9Y446 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PKP3Q9Y446 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PKP3Q9Y446 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
PKP3Q9Y446 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PKP3Q9Y446 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PKP3Q9Y446 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PKP3Q9Y446 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.39■□□□□ 0.21
PKP3Q9Y446 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.39■□□□□ 0.21
PKP3Q9Y446 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.39■□□□□ 0.21
PKP3Q9Y446 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.39■□□□□ 0.21
PKP3Q9Y446 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.39■□□□□ 0.21
PKP3Q9Y446 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.39■□□□□ 0.21
PKP3Q9Y446 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.39■□□□□ 0.21
PKP3Q9Y446 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.39■□□□□ 0.21
PKP3Q9Y446 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.39■□□□□ 0.21
PKP3Q9Y446 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.39■□□□□ 0.21
PKP3Q9Y446 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PKP3Q9Y446 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PKP3Q9Y446 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PKP3Q9Y446 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.39■□□□□ 0.21
PKP3Q9Y446 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
PKP3Q9Y446 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PKP3Q9Y446 AL592424.1-201ENST00000563624 1536 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms