Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 AC138035.3-201ENST00000622706 2791 ntBASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 MIR4492-201ENST00000581627 80 ntBASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 AC083849.1-201ENST00000615227 514 ntBASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 TMBIM7P-203ENST00000641617 1718 ntBASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 AL109954.1-202ENST00000564051 2148 ntBASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 AC020658.6-201ENST00000623564 1870 ntBASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 AL645929.1-201ENST00000420084 975 ntBASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 AC010654.1-201ENST00000615722 808 ntBASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 AL590326.2-201ENST00000625139 305 ntBASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RCL1Q9Y2P8 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms