Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 CR383656.12-201ENST00000549567 513 ntBASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 AC087499.5-201ENST00000452760 1342 ntBASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 FOXO1B-201ENST00000504678 1527 ntBASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSX2IPQ9Y2D8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 RN7SL828P-201ENST00000607615 303 ntBASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 AL589739.1-201ENST00000607720 493 ntBASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms