Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 AL121723.1-201ENST00000445194 1519 ntBASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 RPL13AP25-201ENST00000484130 612 ntBASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 RERG-209ENST00000546331 1383 ntTSL 2 BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
SHANK2Q9UPX8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SHANK2Q9UPX8 AC006449.6-201ENST00000612330 2296 ntBASIC23.8■■□□□ 1.4
SHANK2Q9UPX8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SHANK2Q9UPX8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SHANK2Q9UPX8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SHANK2Q9UPX8 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC23.8■■□□□ 1.4
SHANK2Q9UPX8 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SHANK2Q9UPX8 KRT8P22-201ENST00000562317 1415 ntBASIC23.8■■□□□ 1.4
SHANK2Q9UPX8 AC005229.1-201ENST00000392885 409 ntBASIC23.8■■□□□ 1.4
SHANK2Q9UPX8 MFF-223ENST00000524634 647 ntTSL 2 BASIC23.8■■□□□ 1.4
SHANK2Q9UPX8 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC23.8■■□□□ 1.4
SHANK2Q9UPX8 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC23.8■■□□□ 1.4
SHANK2Q9UPX8 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC23.8■■□□□ 1.4
SHANK2Q9UPX8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SHANK2Q9UPX8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SHANK2Q9UPX8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SHANK2Q9UPX8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SHANK2Q9UPX8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
SHANK2Q9UPX8 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 PDIA3P1-201ENST00000471856 1510 ntBASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 MIR1908-201ENST00000410394 80 ntBASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 ACTG1P3-201ENST00000431775 1114 ntBASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 KRT43P-201ENST00000434019 910 ntBASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 GNRHR2-203ENST00000581100 1187 ntBASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 AC005252.2-201ENST00000624630 1141 ntBASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SHANK2Q9UPX8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHANK2Q9UPX8 AL607033.1-201ENST00000623900 1599 ntBASIC23.78■■□□□ 1.4
SHANK2Q9UPX8 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHANK2Q9UPX8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SHANK2Q9UPX8 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHANK2Q9UPX8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC23.78■■□□□ 1.4
SHANK2Q9UPX8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
SHANK2Q9UPX8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHANK2Q9UPX8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHANK2Q9UPX8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
SHANK2Q9UPX8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC23.78■■□□□ 1.4
SHANK2Q9UPX8 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC23.78■■□□□ 1.4
SHANK2Q9UPX8 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
SHANK2Q9UPX8 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC23.78■■□□□ 1.4
SHANK2Q9UPX8 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHANK2Q9UPX8 AC133539.2-201ENST00000604757 467 ntBASIC23.78■■□□□ 1.4
SHANK2Q9UPX8 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHANK2Q9UPX8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
SHANK2Q9UPX8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC23.78■■□□□ 1.4
SHANK2Q9UPX8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC23.78■■□□□ 1.4
SHANK2Q9UPX8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC23.78■■□□□ 1.4
SHANK2Q9UPX8 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 AGGF1P2-201ENST00000426656 2106 ntBASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 AC020907.1-201ENST00000616460 1350 ntBASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 AC092506.1-202ENST00000401022 528 ntBASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 MPV17-206ENST00000402722 827 ntTSL 3 BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 VDAC1P7-201ENST00000462417 847 ntBASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 TPI1-206ENST00000488464 791 ntTSL 5 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms