Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 AP006288.1-201ENST00000446065 395 ntBASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 AC087163.2-201ENST00000457299 853 ntBASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 YBX1P5-201ENST00000509441 847 ntBASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 AC027796.2-201ENST00000575326 344 ntBASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 AC126177.1-201ENST00000547829 2218 ntBASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
RABGEF1Q9UJ41 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 LINC01144-201ENST00000626198 1710 ntBASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 MRPL20P1-201ENST00000400819 433 ntBASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 HMGN1P19-201ENST00000436976 333 ntBASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 POU5F1P6-201ENST00000466990 990 ntBASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 AL078644.1-201ENST00000609881 752 ntBASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 AC010654.1-201ENST00000615722 808 ntBASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 AC010507.1-201ENST00000633895 436 ntBASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 SLC22A20-204ENST00000530038 1673 ntBASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 AP005117.1-202ENST00000581724 1908 ntBASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 AC112504.1-201ENST00000623415 1841 ntBASIC16.8■□□□□ 0.28
RABGEF1Q9UJ41 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RABGEF1Q9UJ41 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RABGEF1Q9UJ41 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.79■□□□□ 0.28
RABGEF1Q9UJ41 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.79■□□□□ 0.28
RABGEF1Q9UJ41 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RABGEF1Q9UJ41 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RABGEF1Q9UJ41 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RABGEF1Q9UJ41 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RABGEF1Q9UJ41 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.79■□□□□ 0.28
RABGEF1Q9UJ41 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RABGEF1Q9UJ41 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RABGEF1Q9UJ41 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RABGEF1Q9UJ41 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms