Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 LINC01144-201ENST00000626198 1710 ntBASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 PCGF3-213ENST00000620529 1899 ntBASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 MIR1233-2-201ENST00000408138 82 ntBASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 MIR1233-1-201ENST00000408722 82 ntBASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 AC211486.1-202ENST00000416371 468 ntBASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 AC211476.1-201ENST00000503899 468 ntBASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 AC243562.1-201ENST00000560672 389 ntBASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 AC105339.1-204ENST00000636249 355 ntBASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPARGC1AQ9UBK2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 AC007950.2-201ENST00000615045 2347 ntBASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 AP006288.1-201ENST00000446065 395 ntBASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 SPDYE11-202ENST00000450699 704 ntBASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 SPDYE9P-201ENST00000570642 692 ntBASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 SPDYE10P-202ENST00000612005 668 ntBASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 SPDYE8P-202ENST00000612377 668 ntBASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 AC055717.3-201ENST00000622967 595 ntBASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms