Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CISHQ9NSE2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CISHQ9NSE2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CISHQ9NSE2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CISHQ9NSE2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CISHQ9NSE2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CISHQ9NSE2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.37■□□□□ 0.37
CISHQ9NSE2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CISHQ9NSE2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CISHQ9NSE2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.37■□□□□ 0.37
CISHQ9NSE2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.37■□□□□ 0.37
CISHQ9NSE2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CISHQ9NSE2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CISHQ9NSE2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CISHQ9NSE2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.37■□□□□ 0.37
CISHQ9NSE2 RARRES2P9-201ENST00000565168 469 ntBASIC17.37■□□□□ 0.37
CISHQ9NSE2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CISHQ9NSE2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.37■□□□□ 0.37
CISHQ9NSE2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.37■□□□□ 0.37
CISHQ9NSE2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.37■□□□□ 0.37
CISHQ9NSE2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CISHQ9NSE2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.37■□□□□ 0.37
CISHQ9NSE2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CISHQ9NSE2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.37■□□□□ 0.37
CISHQ9NSE2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CISHQ9NSE2 TNRC18P3-201ENST00000441896 2691 ntBASIC17.37■□□□□ 0.37
CISHQ9NSE2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.37■□□□□ 0.37
CISHQ9NSE2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CISHQ9NSE2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.37■□□□□ 0.37
CISHQ9NSE2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CISHQ9NSE2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.37■□□□□ 0.37
CISHQ9NSE2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.37■□□□□ 0.37
CISHQ9NSE2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.37■□□□□ 0.37
CISHQ9NSE2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CISHQ9NSE2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CISHQ9NSE2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CISHQ9NSE2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CISHQ9NSE2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CISHQ9NSE2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.36■□□□□ 0.37
CISHQ9NSE2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CISHQ9NSE2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CISHQ9NSE2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CISHQ9NSE2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CISHQ9NSE2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CISHQ9NSE2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CISHQ9NSE2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CISHQ9NSE2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CISHQ9NSE2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CISHQ9NSE2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CISHQ9NSE2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CISHQ9NSE2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CISHQ9NSE2 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.36■□□□□ 0.37
CISHQ9NSE2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.36■□□□□ 0.37
CISHQ9NSE2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.36■□□□□ 0.37
CISHQ9NSE2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CISHQ9NSE2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.36■□□□□ 0.37
CISHQ9NSE2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.36■□□□□ 0.37
CISHQ9NSE2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.36■□□□□ 0.37
CISHQ9NSE2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.36■□□□□ 0.37
CISHQ9NSE2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CISHQ9NSE2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.36■□□□□ 0.37
CISHQ9NSE2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.36■□□□□ 0.37
CISHQ9NSE2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CISHQ9NSE2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CISHQ9NSE2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CISHQ9NSE2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CISHQ9NSE2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CISHQ9NSE2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CISHQ9NSE2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CISHQ9NSE2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CISHQ9NSE2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CISHQ9NSE2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CISHQ9NSE2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.36■□□□□ 0.37
CISHQ9NSE2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CISHQ9NSE2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CISHQ9NSE2 PCDHA1-201ENST00000378133 2726 ntBASIC17.35■□□□□ 0.37
CISHQ9NSE2 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.35■□□□□ 0.37
CISHQ9NSE2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CISHQ9NSE2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CISHQ9NSE2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CISHQ9NSE2 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CISHQ9NSE2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.35■□□□□ 0.37
CISHQ9NSE2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CISHQ9NSE2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CISHQ9NSE2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CISHQ9NSE2 MIR648-201ENST00000385046 94 ntBASIC17.35■□□□□ 0.37
CISHQ9NSE2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CISHQ9NSE2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.35■□□□□ 0.37
CISHQ9NSE2 SPDYE14P-201ENST00000442619 822 ntBASIC17.35■□□□□ 0.37
CISHQ9NSE2 AC245100.5-201ENST00000452108 331 ntBASIC17.35■□□□□ 0.37
CISHQ9NSE2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CISHQ9NSE2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.35■□□□□ 0.37
CISHQ9NSE2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.35■□□□□ 0.37
CISHQ9NSE2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CISHQ9NSE2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.35■□□□□ 0.37
CISHQ9NSE2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CISHQ9NSE2 AC026150.2-201ENST00000564693 1156 ntBASIC17.35■□□□□ 0.37
CISHQ9NSE2 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.35■□□□□ 0.37
CISHQ9NSE2 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.35■□□□□ 0.37
CISHQ9NSE2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms