Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 MTDHP3-201ENST00000594186 672 ntBASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 MYO15B-237ENST00000642007 4893 ntBASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 AC073347.1-201ENST00000421633 2643 ntBASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 AC129492.6-201ENST00000611383 1305 ntBASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.31□□□□□ -0.28
CTNNBIP1Q9NSA3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 AC005622.1-201ENST00000636801 1703 ntBASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 SLC25A6P2-201ENST00000497974 877 ntBASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 AC087388.1-201ENST00000571370 1112 ntBASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 AC138894.3-201ENST00000603787 634 ntBASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 AC069148.1-201ENST00000608741 768 ntBASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 NPAP1P7-201ENST00000613027 823 ntBASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 AP000550.4-202ENST00000639755 178 ntBASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
CTNNBIP1Q9NSA3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTNNBIP1Q9NSA3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTNNBIP1Q9NSA3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.29□□□□□ -0.28
CTNNBIP1Q9NSA3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTNNBIP1Q9NSA3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTNNBIP1Q9NSA3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CTNNBIP1Q9NSA3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CTNNBIP1Q9NSA3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.29□□□□□ -0.28
CTNNBIP1Q9NSA3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTNNBIP1Q9NSA3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.29□□□□□ -0.28
CTNNBIP1Q9NSA3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTNNBIP1Q9NSA3 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.29□□□□□ -0.28
CTNNBIP1Q9NSA3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTNNBIP1Q9NSA3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CTNNBIP1Q9NSA3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms