Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 WFDC1-204ENST00000613603 549 ntBASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 AL033527.5-202ENST00000641632 1098 ntBASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDLIM7Q9NR12 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
PDLIM7Q9NR12 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.08■□□□□ 0.49
PDLIM7Q9NR12 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDLIM7Q9NR12 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDLIM7Q9NR12 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDLIM7Q9NR12 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDLIM7Q9NR12 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.08■□□□□ 0.49
PDLIM7Q9NR12 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.08■□□□□ 0.49
PDLIM7Q9NR12 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDLIM7Q9NR12 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.08■□□□□ 0.49
PDLIM7Q9NR12 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDLIM7Q9NR12 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.08■□□□□ 0.49
PDLIM7Q9NR12 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.08■□□□□ 0.49
PDLIM7Q9NR12 U82695.1-201ENST00000635752 1889 ntBASIC18.08■□□□□ 0.49
PDLIM7Q9NR12 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDLIM7Q9NR12 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 AC093726.1-201ENST00000608064 963 ntBASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 AL592424.1-201ENST00000563624 1536 ntBASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.08■□□□□ 0.48
PDLIM7Q9NR12 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 ACTBP11-201ENST00000436287 1126 ntBASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 SDHAP3-202ENST00000515467 728 ntBASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 AC104989.1-201ENST00000519711 778 ntBASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 MIR6787-201ENST00000616675 61 ntBASIC18.07■□□□□ 0.48
PDLIM7Q9NR12 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms