Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 AC112191.1-201ENST00000523689 701 ntBASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 AP002472.1-201ENST00000577490 586 ntBASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 PAUPAR-201ENST00000630360 2965 ntBASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 AC073439.1-201ENST00000624121 1774 ntBASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC40Q9H9A6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRRC40Q9H9A6 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRRC40Q9H9A6 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.58■□□□□ 0.25
LRRC40Q9H9A6 AC105917.1-201ENST00000506637 2539 ntBASIC16.58■□□□□ 0.25
LRRC40Q9H9A6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRRC40Q9H9A6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.58■□□□□ 0.25
LRRC40Q9H9A6 AC132872.4-202ENST00000622924 2756 ntBASIC16.58■□□□□ 0.25
LRRC40Q9H9A6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC40Q9H9A6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 CDC14C-201ENST00000428251 1719 ntBASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms