Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.383e-6■□□□□ 10.6
XRN2Q9H0D6 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.523e-6■□□□□ 10.6
XRN2Q9H0D6 LDLR-208ENST00000558518 3617 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.693e-6■□□□□ 10.6
XRN2Q9H0D6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.294e-6■□□□□ 10.6
XRN2Q9H0D6 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.214e-6■□□□□ 10.6
XRN2Q9H0D6 BCL2L1-208ENST00000450273 894 ntTSL 321.95■■□□□ 1.16e-10■□□□□ 10.6
XRN2Q9H0D6 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.44□□□□□ -0.266e-10■□□□□ 10.6
XRN2Q9H0D6 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.266e-10■□□□□ 10.6
XRN2Q9H0D6 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.46e-10■□□□□ 10.6
XRN2Q9H0D6 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC10.46□□□□□ -0.733e-13■□□□□ 10.6
XRN2Q9H0D6 GPR75-ASB3-202ENST00000459916 556 ntTSL 427.82■■■□□ 2.046e-10■□□□□ 10.6
XRN2Q9H0D6 IGF2BP2-205ENST00000461957 509 ntTSL 515.99■□□□□ 0.152e-9■□□□□ 10.6
XRN2Q9H0D6 IGF2BP2-209ENST00000493302 358 ntTSL 57.44□□□□□ -1.222e-9■□□□□ 10.6
XRN2Q9H0D6 CORO7-PAM16-201ENST00000572274 672 ntTSL 519.05■□□□□ 0.643e-6■□□□□ 10.6
XRN2Q9H0D6 FTX-218ENST00000641360 3897 nt5.67□□□□□ -1.53e-22■□□□□ 10.6
XRN2Q9H0D6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.23e-8■□□□□ 10.6
XRN2Q9H0D6 SLC43A1-203ENST00000525764 556 ntTSL 315.27■□□□□ 0.043e-8■□□□□ 10.6
XRN2Q9H0D6 ATP5B-203ENST00000547808 705 ntTSL 523.1■■□□□ 1.294e-8■□□□□ 10.6
XRN2Q9H0D6 ATP5B-210ENST00000552959 1085 ntTSL 323.1■■□□□ 1.294e-8■□□□□ 10.6
XRN2Q9H0D6 ATP5B-207ENST00000551020 856 ntTSL 322.18■■□□□ 1.144e-8■□□□□ 10.6
XRN2Q9H0D6 ATP5B-211ENST00000553007 814 ntTSL 522.18■■□□□ 1.144e-8■□□□□ 10.6
XRN2Q9H0D6 FAM193B-213ENST00000510429 839 ntTSL 319.19■□□□□ 0.664e-8■□□□□ 10.6
XRN2Q9H0D6 ATP5B-205ENST00000548647 682 ntTSL 518.96■□□□□ 0.634e-8■□□□□ 10.6
XRN2Q9H0D6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.594e-8■□□□□ 10.6
XRN2Q9H0D6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.134e-7■□□□□ 10.6
XRN2Q9H0D6 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.49□□□□□ -0.094e-7■□□□□ 10.6
XRN2Q9H0D6 SLC16A3-210ENST00000580189 872 ntTSL 522.29■■□□□ 1.161e-6■□□□□ 10.6
XRN2Q9H0D6 SLC16A3-204ENST00000578522 535 ntTSL 420.08■□□□□ 0.811e-6■□□□□ 10.6
XRN2Q9H0D6 RAB1A-205ENST00000494188 771 ntTSL 226.69■■□□□ 1.864e-6■□□□□ 10.6
XRN2Q9H0D6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC24.51■■□□□ 1.514e-6■□□□□ 10.6
XRN2Q9H0D6 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.67■□□□□ 0.424e-6■□□□□ 10.6
XRN2Q9H0D6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.23■□□□□ 0.354e-6■□□□□ 10.6
XRN2Q9H0D6 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.14e-6■□□□□ 10.6
XRN2Q9H0D6 C3-205ENST00000595577 714 ntTSL 215.11■□□□□ 0.014e-6■□□□□ 10.6
XRN2Q9H0D6 C3-209ENST00000597442 469 ntTSL 314.29□□□□□ -0.124e-6■□□□□ 10.6
XRN2Q9H0D6 SFT2D1-202ENST00000478705 659 ntTSL 220.06■□□□□ 0.84e-6■□□□□ 10.5
XRN2Q9H0D6 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.794e-6■□□□□ 10.5
XRN2Q9H0D6 SLC16A3-207ENST00000578810 678 ntTSL 218.33■□□□□ 0.521e-6■□□□□ 10.5
XRN2Q9H0D6 SFT2D1-204ENST00000487841 2576 ntTSL 1 (best)12.8□□□□□ -0.364e-6■□□□□ 10.5
XRN2Q9H0D6 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.482e-38■□□□□ 10.5
XRN2Q9H0D6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.74■■□□□ 1.872e-38■□□□□ 10.5
XRN2Q9H0D6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.42e-38■□□□□ 10.5
XRN2Q9H0D6 EEF1A1-207ENST00000490569 1802 ntTSL 58.88□□□□□ -0.991e-8■□□□□ 10.5
XRN2Q9H0D6 EEF1A1-209ENST00000495333 958 ntTSL 58.09□□□□□ -1.111e-8■□□□□ 10.5
XRN2Q9H0D6 EEF1A1-206ENST00000488500 792 ntTSL 27.74□□□□□ -1.171e-8■□□□□ 10.5
XRN2Q9H0D6 EEF1A1-208ENST00000491404 633 ntTSL 35.19□□□□□ -1.581e-8■□□□□ 10.5
XRN2Q9H0D6 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.42e-14■□□□□ 10.5
XRN2Q9H0D6 POLR3E-218ENST00000569787 727 ntTSL 316.09■□□□□ 0.171e-6■□□□□ 10.5
XRN2Q9H0D6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.03■□□□□ 0.87e-10■□□□□ 10.5
XRN2Q9H0D6 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.327e-10■□□□□ 10.5
XRN2Q9H0D6 MYL6-216ENST00000550184 1564 ntTSL 516.98■□□□□ 0.317e-10■□□□□ 10.5
XRN2Q9H0D6 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.167e-10■□□□□ 10.5
XRN2Q9H0D6 MYL6-215ENST00000549566 685 ntTSL 2 BASIC15.51■□□□□ 0.077e-10■□□□□ 10.5
XRN2Q9H0D6 MYL6-210ENST00000548400 573 ntTSL 3 BASIC14.81□□□□□ -0.047e-10■□□□□ 10.5
XRN2Q9H0D6 MYL6-207ENST00000547649 655 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.657e-10■□□□□ 10.5
XRN2Q9H0D6 MYL6-206ENST00000547408 683 ntTSL 3 BASIC10.95□□□□□ -0.667e-10■□□□□ 10.5
XRN2Q9H0D6 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC9.21□□□□□ -0.947e-10■□□□□ 10.5
XRN2Q9H0D6 MYL6-211ENST00000548580 528 ntTSL 2 BASIC8.36□□□□□ -1.077e-10■□□□□ 10.5
XRN2Q9H0D6 MYL6-213ENST00000549017 502 ntTSL 3 BASIC7.07□□□□□ -1.287e-10■□□□□ 10.5
XRN2Q9H0D6 ASAH1-250ENST00000637536 562 ntTSL 426.61■■□□□ 1.856e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-219ENST00000636033 1940 ntTSL 522.61■■□□□ 1.216e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.61■■□□□ 1.056e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-266ENST00000637946 913 ntTSL 521.33■■□□□ 1.016e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-209ENST00000520051 667 ntTSL 520.44■□□□□ 0.866e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.44■□□□□ 0.866e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-252ENST00000637603 579 ntTSL 419.85■□□□□ 0.776e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-215ENST00000635769 575 ntTSL 419.53■□□□□ 0.726e-7■□□□□ 10.5
XRN2Q9H0D6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.696e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-212ENST00000523593 586 ntTSL 519.35■□□□□ 0.696e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-264ENST00000637898 664 ntTSL 219.18■□□□□ 0.666e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-244ENST00000637202 1634 ntTSL 519.16■□□□□ 0.666e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-239ENST00000636920 1989 ntTSL 519.04■□□□□ 0.646e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-205ENST00000518087 918 ntTSL 518.98■□□□□ 0.636e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-216ENST00000635944 1960 ntTSL 518.54■□□□□ 0.566e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.22■□□□□ 0.516e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-236ENST00000636815 1724 ntTSL 518.09■□□□□ 0.496e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.98■□□□□ 0.476e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-233ENST00000636701 2158 ntTSL 517.65■□□□□ 0.426e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-217ENST00000635998 1845 ntTSL 517.53■□□□□ 0.46e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.316e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-243ENST00000637095 2048 ntTSL 516.97■□□□□ 0.316e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.81■□□□□ 0.286e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.51■□□□□ 0.236e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-207ENST00000519468 746 ntTSL 316.29■□□□□ 0.26e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-228ENST00000636494 1975 ntTSL 515.91■□□□□ 0.146e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.73■□□□□ 0.116e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-222ENST00000636160 2328 ntTSL 515.64■□□□□ 0.096e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.086e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.52■□□□□ 0.086e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-241ENST00000637013 2649 ntTSL 515.16■□□□□ 0.026e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-247ENST00000637429 2558 ntTSL 514.27□□□□□ -0.136e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-245ENST00000637244 3151 ntTSL 1 (best)14.12□□□□□ -0.156e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.246e-7■□□□□ 10.5
XRN2Q9H0D6 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.246e-7■□□□□ 10.5
XRN2Q9H0D6 CYBA-205ENST00000565588 221 ntTSL 212.79□□□□□ -0.366e-7■□□□□ 10.5
XRN2Q9H0D6 ARRB1-211ENST00000533255 551 ntTSL 212.64□□□□□ -0.396e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-202ENST00000314146 1690 ntTSL 1 (best) BASIC11.84□□□□□ -0.516e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-269ENST00000638069 3068 ntTSL 511.63□□□□□ -0.556e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-259ENST00000637792 581 ntTSL 410.96□□□□□ -0.656e-7■□□□□ 10.5
XRN2Q9H0D6 ASAH1-225ENST00000636299 543 ntTSL 410.96□□□□□ -0.656e-7■□□□□ 10.5
Retrieved 100 of 21,068 protein–RNA pairs in 86 ms