Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 AC069224.1-201ENST00000566372 1715 ntBASIC14.07□□□□□ -0.16
NICN1Q9BSH3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.06□□□□□ -0.16
NICN1Q9BSH3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 AC087641.1-201ENST00000557561 1021 ntBASIC14.06□□□□□ -0.16
NICN1Q9BSH3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.06□□□□□ -0.16
NICN1Q9BSH3 AC093458.2-201ENST00000623150 629 ntBASIC14.06□□□□□ -0.16
NICN1Q9BSH3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NICN1Q9BSH3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 FGFR3P6-201ENST00000457012 610 ntBASIC14.05□□□□□ -0.16
NICN1Q9BSH3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 AL355877.3-201ENST00000622820 899 ntBASIC14.05□□□□□ -0.16
NICN1Q9BSH3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.05□□□□□ -0.16
NICN1Q9BSH3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms