Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
USB1Q9BQ65 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
USB1Q9BQ65 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
USB1Q9BQ65 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
USB1Q9BQ65 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
USB1Q9BQ65 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
USB1Q9BQ65 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
USB1Q9BQ65 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
USB1Q9BQ65 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
USB1Q9BQ65 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
USB1Q9BQ65 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
USB1Q9BQ65 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 PMS2P2-201ENST00000425039 1128 ntBASIC14.68□□□□□ -0.06
USB1Q9BQ65 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 KATNBL1P4-201ENST00000503545 918 ntBASIC14.68□□□□□ -0.06
USB1Q9BQ65 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
USB1Q9BQ65 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
USB1Q9BQ65 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
USB1Q9BQ65 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
USB1Q9BQ65 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
USB1Q9BQ65 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
USB1Q9BQ65 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
USB1Q9BQ65 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.68□□□□□ -0.06
USB1Q9BQ65 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
USB1Q9BQ65 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
USB1Q9BQ65 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
USB1Q9BQ65 KRT18P28-201ENST00000453838 1332 ntBASIC14.67□□□□□ -0.06
USB1Q9BQ65 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
USB1Q9BQ65 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
USB1Q9BQ65 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
USB1Q9BQ65 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
USB1Q9BQ65 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
USB1Q9BQ65 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
USB1Q9BQ65 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
USB1Q9BQ65 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
USB1Q9BQ65 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
USB1Q9BQ65 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
USB1Q9BQ65 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
USB1Q9BQ65 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
USB1Q9BQ65 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
USB1Q9BQ65 RNU1-129P-201ENST00000384064 167 ntBASIC14.67□□□□□ -0.06
USB1Q9BQ65 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
USB1Q9BQ65 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
USB1Q9BQ65 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
USB1Q9BQ65 DUX4L17-201ENST00000557360 1267 ntBASIC14.67□□□□□ -0.06
USB1Q9BQ65 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 U1.21-201ENST00000580816 167 ntBASIC14.67□□□□□ -0.06
USB1Q9BQ65 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 AL031055.1-201ENST00000606362 631 ntBASIC14.67□□□□□ -0.06
USB1Q9BQ65 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
USB1Q9BQ65 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 CICP14-201ENST00000629111 2732 ntBASIC14.67□□□□□ -0.06
USB1Q9BQ65 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
USB1Q9BQ65 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.67□□□□□ -0.06
USB1Q9BQ65 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms