Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PKD1P1-201ENST00000458669 6805 ntBASIC17.03■□□□□ 0.32
SMOQ99835 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMOQ99835 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.03■□□□□ 0.32
SMOQ99835 AL691432.1-201ENST00000596308 1422 ntBASIC17.03■□□□□ 0.32
SMOQ99835 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMOQ99835 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMOQ99835 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMOQ99835 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMOQ99835 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
SMOQ99835 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMOQ99835 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMOQ99835 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.03■□□□□ 0.32
SMOQ99835 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SMOQ99835 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMOQ99835 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMOQ99835 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMOQ99835 CYP4F24P-201ENST00000586049 1580 ntBASIC17.02■□□□□ 0.32
SMOQ99835 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SMOQ99835 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMOQ99835 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
SMOQ99835 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.02■□□□□ 0.32
SMOQ99835 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.02■□□□□ 0.32
SMOQ99835 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
SMOQ99835 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMOQ99835 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMOQ99835 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMOQ99835 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SMOQ99835 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SMOQ99835 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.02■□□□□ 0.32
SMOQ99835 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMOQ99835 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.02■□□□□ 0.32
SMOQ99835 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SMOQ99835 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMOQ99835 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SMOQ99835 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMOQ99835 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMOQ99835 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMOQ99835 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
SMOQ99835 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.02■□□□□ 0.32
SMOQ99835 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.02■□□□□ 0.32
SMOQ99835 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.02■□□□□ 0.32
SMOQ99835 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.02■□□□□ 0.32
SMOQ99835 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.02■□□□□ 0.32
SMOQ99835 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.02■□□□□ 0.32
SMOQ99835 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMOQ99835 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.02■□□□□ 0.31
SMOQ99835 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.02■□□□□ 0.31
SMOQ99835 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMOQ99835 AL596087.1-201ENST00000400979 1969 ntBASIC17.02■□□□□ 0.31
SMOQ99835 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMOQ99835 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SMOQ99835 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMOQ99835 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SMOQ99835 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMOQ99835 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.02■□□□□ 0.31
SMOQ99835 MTHFR-217ENST00000641820 1569 ntBASIC17.02■□□□□ 0.31
SMOQ99835 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SMOQ99835 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.01■□□□□ 0.31
SMOQ99835 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.01■□□□□ 0.31
SMOQ99835 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SMOQ99835 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SMOQ99835 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SMOQ99835 PCDHB19P-201ENST00000570871 2371 ntBASIC17.01■□□□□ 0.31
SMOQ99835 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.01■□□□□ 0.31
SMOQ99835 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.01■□□□□ 0.31
SMOQ99835 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.01■□□□□ 0.31
SMOQ99835 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SMOQ99835 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.01■□□□□ 0.31
SMOQ99835 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 UGT1A2P-201ENST00000454886 866 ntBASIC17.01■□□□□ 0.31
SMOQ99835 AC004890.2-204ENST00000481968 304 ntBASIC17.01■□□□□ 0.31
SMOQ99835 RNA5SP421-201ENST00000516864 134 ntBASIC17.01■□□□□ 0.31
SMOQ99835 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.01■□□□□ 0.31
SMOQ99835 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.01■□□□□ 0.31
SMOQ99835 AC011467.4-201ENST00000594891 528 ntBASIC17.01■□□□□ 0.31
SMOQ99835 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.01■□□□□ 0.31
SMOQ99835 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.01■□□□□ 0.31
SMOQ99835 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SMOQ99835 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SMOQ99835 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms