Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 AC006538.1-201ENST00000567905 1585 ntBASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 SLC7A15P-201ENST00000424028 1363 ntBASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 AC112492.5-201ENST00000421897 457 ntBASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 AC114501.2-201ENST00000439631 535 ntBASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 AC044860.1-202ENST00000559481 777 ntBASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 RAB43P1-201ENST00000561790 589 ntBASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 RNF216P1-203ENST00000404404 2427 ntBASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 AL671710.1-201ENST00000610245 2349 ntBASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 SERBP1P3-201ENST00000459980 809 ntBASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 AC004790.1-201ENST00000612686 536 ntBASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 AC007431.3-201ENST00000623221 587 ntBASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 SNX33P1-201ENST00000592116 1762 ntBASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC46A1Q96NT5 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SLC46A1Q96NT5 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms