Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 OR6D1P-203ENST00000641209 4860 ntBASIC18.9■□□□□ 0.62
CCDC17Q96LX7 AD000864.1-201ENST00000624076 2295 ntBASIC18.9■□□□□ 0.62
CCDC17Q96LX7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 SPDYE19P-201ENST00000338590 713 ntBASIC18.9■□□□□ 0.62
CCDC17Q96LX7 AC087499.6-201ENST00000411576 835 ntBASIC18.9■□□□□ 0.62
CCDC17Q96LX7 AC005034.1-201ENST00000426657 489 ntBASIC18.9■□□□□ 0.62
CCDC17Q96LX7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 AC074044.1-201ENST00000609673 707 ntBASIC18.9■□□□□ 0.62
CCDC17Q96LX7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.9■□□□□ 0.62
CCDC17Q96LX7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC17Q96LX7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.89■□□□□ 0.62
CCDC17Q96LX7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC17Q96LX7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 MEP1AP4-201ENST00000423244 1087 ntBASIC18.89■□□□□ 0.61
CCDC17Q96LX7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 GAPDHP21-201ENST00000450301 1010 ntBASIC18.89■□□□□ 0.61
CCDC17Q96LX7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 SPDYE18-201ENST00000510091 1050 ntBASIC18.89■□□□□ 0.61
CCDC17Q96LX7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 CR383656.12-201ENST00000549567 513 ntBASIC18.89■□□□□ 0.61
CCDC17Q96LX7 AL596325.1-201ENST00000563991 1082 ntBASIC18.89■□□□□ 0.61
CCDC17Q96LX7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 AL035252.4-201ENST00000624174 288 ntBASIC18.89■□□□□ 0.61
CCDC17Q96LX7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC17Q96LX7 AC005052.1-201ENST00000625181 2492 ntBASIC18.89■□□□□ 0.61
CCDC17Q96LX7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 AC009053.2-201ENST00000563701 2365 ntBASIC18.88■□□□□ 0.61
CCDC17Q96LX7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 AC092337.1-201ENST00000568699 1129 ntBASIC18.88■□□□□ 0.61
CCDC17Q96LX7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 AC140912.1-201ENST00000577171 1054 ntBASIC18.88■□□□□ 0.61
CCDC17Q96LX7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 AC004790.1-201ENST00000612686 536 ntBASIC18.88■□□□□ 0.61
CCDC17Q96LX7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 KRT8P37-201ENST00000451609 1420 ntBASIC18.88■□□□□ 0.61
CCDC17Q96LX7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC17Q96LX7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms