Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 SPCS2P4-201ENST00000436160 681 ntBASIC18.96■□□□□ 0.63
PGBD1Q96JS3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 AC093520.2-201ENST00000561830 333 ntBASIC18.96■□□□□ 0.63
PGBD1Q96JS3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 AC021097.1-201ENST00000607902 574 ntBASIC18.96■□□□□ 0.63
PGBD1Q96JS3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 AC011270.2-201ENST00000624293 2550 ntBASIC18.96■□□□□ 0.63
PGBD1Q96JS3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 AC254562.1-201ENST00000417586 456 ntBASIC18.95■□□□□ 0.62
PGBD1Q96JS3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PGBD1Q96JS3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 AC092183.1-201ENST00000469884 875 ntBASIC18.94■□□□□ 0.62
PGBD1Q96JS3 AC069335.1-201ENST00000489972 472 ntBASIC18.94■□□□□ 0.62
PGBD1Q96JS3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 LINC01144-201ENST00000626198 1710 ntBASIC18.94■□□□□ 0.62
PGBD1Q96JS3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD1Q96JS3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.93■□□□□ 0.62
PGBD1Q96JS3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.93■□□□□ 0.62
PGBD1Q96JS3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PGBD1Q96JS3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PGBD1Q96JS3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PGBD1Q96JS3 AC112504.1-201ENST00000623415 1841 ntBASIC18.93■□□□□ 0.62
PGBD1Q96JS3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.93■□□□□ 0.62
PGBD1Q96JS3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PGBD1Q96JS3 AC092384.3-202ENST00000564646 2873 ntBASIC18.93■□□□□ 0.62
PGBD1Q96JS3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PGBD1Q96JS3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.93■□□□□ 0.62
PGBD1Q96JS3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms