Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.57■□□□□ 0.4
LRCH3Q96II8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH3Q96II8 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH3Q96II8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH3Q96II8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH3Q96II8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH3Q96II8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH3Q96II8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH3Q96II8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH3Q96II8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH3Q96II8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH3Q96II8 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.56■□□□□ 0.4
LRCH3Q96II8 AC234644.1-201ENST00000406065 370 ntBASIC17.56■□□□□ 0.4
LRCH3Q96II8 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
LRCH3Q96II8 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH3Q96II8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.56■□□□□ 0.4
LRCH3Q96II8 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.56■□□□□ 0.4
LRCH3Q96II8 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.56■□□□□ 0.4
LRCH3Q96II8 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH3Q96II8 SCARNA20.5-201ENST00000516991 142 ntBASIC17.56■□□□□ 0.4
LRCH3Q96II8 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.56■□□□□ 0.4
LRCH3Q96II8 MPDU1-223ENST00000582151 728 ntBASIC17.56■□□□□ 0.4
LRCH3Q96II8 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LRCH3Q96II8 AC133539.2-201ENST00000604757 467 ntBASIC17.56■□□□□ 0.4
LRCH3Q96II8 AL008638.5-201ENST00000623814 1298 ntBASIC17.56■□□□□ 0.4
LRCH3Q96II8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.56■□□□□ 0.4
LRCH3Q96II8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH3Q96II8 REXO1L11P-201ENST00000620964 1927 ntBASIC17.56■□□□□ 0.4
LRCH3Q96II8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH3Q96II8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRCH3Q96II8 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH3Q96II8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
LRCH3Q96II8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LRCH3Q96II8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.56■□□□□ 0.4
LRCH3Q96II8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LRCH3Q96II8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.56■□□□□ 0.4
LRCH3Q96II8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH3Q96II8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH3Q96II8 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.56■□□□□ 0.4
LRCH3Q96II8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
LRCH3Q96II8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.56■□□□□ 0.4
LRCH3Q96II8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH3Q96II8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LRCH3Q96II8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH3Q96II8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH3Q96II8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH3Q96II8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
LRCH3Q96II8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.55■□□□□ 0.4
LRCH3Q96II8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH3Q96II8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH3Q96II8 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.55■□□□□ 0.4
LRCH3Q96II8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH3Q96II8 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH3Q96II8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH3Q96II8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.55■□□□□ 0.4
LRCH3Q96II8 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH3Q96II8 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.55■□□□□ 0.4
LRCH3Q96II8 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH3Q96II8 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.55■□□□□ 0.4
LRCH3Q96II8 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.55■□□□□ 0.4
LRCH3Q96II8 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.55■□□□□ 0.4
LRCH3Q96II8 TIMM17BP1-201ENST00000545713 516 ntBASIC17.55■□□□□ 0.4
LRCH3Q96II8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.55■□□□□ 0.4
LRCH3Q96II8 AC079316.1-201ENST00000548397 411 ntBASIC17.55■□□□□ 0.4
LRCH3Q96II8 CYP2A7P1-201ENST00000595391 815 ntBASIC17.55■□□□□ 0.4
LRCH3Q96II8 MIR6069-201ENST00000620069 79 ntBASIC17.55■□□□□ 0.4
LRCH3Q96II8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.55■□□□□ 0.4
LRCH3Q96II8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH3Q96II8 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH3Q96II8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH3Q96II8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH3Q96II8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH3Q96II8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.55■□□□□ 0.4
LRCH3Q96II8 AC138028.6-201ENST00000616106 1482 ntBASIC17.55■□□□□ 0.4
LRCH3Q96II8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH3Q96II8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH3Q96II8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.55■□□□□ 0.4
LRCH3Q96II8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LRCH3Q96II8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.55■□□□□ 0.4
LRCH3Q96II8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH3Q96II8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH3Q96II8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH3Q96II8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
LRCH3Q96II8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH3Q96II8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH3Q96II8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LRCH3Q96II8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH3Q96II8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH3Q96II8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.54■□□□□ 0.4
LRCH3Q96II8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH3Q96II8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
LRCH3Q96II8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH3Q96II8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH3Q96II8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH3Q96II8 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.54■□□□□ 0.4
LRCH3Q96II8 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LRCH3Q96II8 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.54■□□□□ 0.4
LRCH3Q96II8 IMP3P2-201ENST00000489760 475 ntBASIC17.54■□□□□ 0.4
LRCH3Q96II8 AC068587.3-201ENST00000526613 355 ntBASIC17.54■□□□□ 0.4
LRCH3Q96II8 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms