Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 SPDYE19P-201ENST00000338590 713 ntBASIC16.32■□□□□ 0.2
SIPA1Q96FS4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 AL391825.1-201ENST00000457671 1364 ntBASIC16.32■□□□□ 0.2
SIPA1Q96FS4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 MIR6069-201ENST00000620069 79 ntBASIC16.32■□□□□ 0.2
SIPA1Q96FS4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.32■□□□□ 0.2
SIPA1Q96FS4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 AC005622.1-201ENST00000636801 1703 ntBASIC16.31■□□□□ 0.2
SIPA1Q96FS4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 AC098614.1-201ENST00000368528 745 ntBASIC16.31■□□□□ 0.2
SIPA1Q96FS4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 SDHAP3-202ENST00000515467 728 ntBASIC16.31■□□□□ 0.2
SIPA1Q96FS4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 PRORSD1P-202ENST00000563365 2154 ntBASIC16.31■□□□□ 0.2
SIPA1Q96FS4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SIPA1Q96FS4 LINC01144-201ENST00000626198 1710 ntBASIC16.31■□□□□ 0.2
SIPA1Q96FS4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 AC138969.3-201ENST00000546612 1459 ntBASIC16.3■□□□□ 0.2
SIPA1Q96FS4 AC138932.2-201ENST00000548268 1459 ntBASIC16.3■□□□□ 0.2
SIPA1Q96FS4 AC126755.4-201ENST00000549796 1459 ntBASIC16.3■□□□□ 0.2
SIPA1Q96FS4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 AC114501.2-201ENST00000439631 535 ntBASIC16.3■□□□□ 0.2
SIPA1Q96FS4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 AC093004.1-201ENST00000508850 424 ntBASIC16.3■□□□□ 0.2
SIPA1Q96FS4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms