Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE2Q96FN4 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.28□□□□□ -0.12
CPNE2Q96FN4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.28□□□□□ -0.12
CPNE2Q96FN4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.28□□□□□ -0.12
CPNE2Q96FN4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.28□□□□□ -0.12
CPNE2Q96FN4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.28□□□□□ -0.12
CPNE2Q96FN4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE2Q96FN4 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CPNE2Q96FN4 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CPNE2Q96FN4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CPNE2Q96FN4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.28□□□□□ -0.12
CPNE2Q96FN4 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE2Q96FN4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE2Q96FN4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE2Q96FN4 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE2Q96FN4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CPNE2Q96FN4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE2Q96FN4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE2Q96FN4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE2Q96FN4 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE2Q96FN4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CPNE2Q96FN4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CPNE2Q96FN4 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CPNE2Q96FN4 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CPNE2Q96FN4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CPNE2Q96FN4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
CPNE2Q96FN4 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CPNE2Q96FN4 AL596087.1-201ENST00000400979 1969 ntBASIC14.27□□□□□ -0.12
CPNE2Q96FN4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.27□□□□□ -0.12
CPNE2Q96FN4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.27□□□□□ -0.12
CPNE2Q96FN4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CPNE2Q96FN4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CPNE2Q96FN4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CPNE2Q96FN4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CPNE2Q96FN4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CPNE2Q96FN4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CPNE2Q96FN4 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CPNE2Q96FN4 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CPNE2Q96FN4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 SART3-203ENST00000546611 1184 ntBASIC14.27□□□□□ -0.13
CPNE2Q96FN4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 REXO1L6P-202ENST00000619970 1078 ntBASIC14.27□□□□□ -0.13
CPNE2Q96FN4 MIR1199-201ENST00000621445 119 ntBASIC14.27□□□□□ -0.13
CPNE2Q96FN4 PGM5P2-202ENST00000637225 1043 ntBASIC14.27□□□□□ -0.13
CPNE2Q96FN4 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 SNX33P1-201ENST00000592116 1762 ntBASIC14.27□□□□□ -0.13
CPNE2Q96FN4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE2Q96FN4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CPNE2Q96FN4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CPNE2Q96FN4 SBF1P1-201ENST00000444527 5631 ntBASIC14.26□□□□□ -0.13
CPNE2Q96FN4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CPNE2Q96FN4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CPNE2Q96FN4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPNE2Q96FN4 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.26□□□□□ -0.13
CPNE2Q96FN4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.26□□□□□ -0.13
CPNE2Q96FN4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPNE2Q96FN4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPNE2Q96FN4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CPNE2Q96FN4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CPNE2Q96FN4 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPNE2Q96FN4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CPNE2Q96FN4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms