Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC97Q96F63 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC97Q96F63 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC97Q96F63 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC97Q96F63 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CCDC97Q96F63 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC97Q96F63 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC97Q96F63 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC97Q96F63 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC97Q96F63 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC97Q96F63 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC97Q96F63 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC97Q96F63 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC97Q96F63 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCDC97Q96F63 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC97Q96F63 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC97Q96F63 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC97Q96F63 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC97Q96F63 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC97Q96F63 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC97Q96F63 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC97Q96F63 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC97Q96F63 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC97Q96F63 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC97Q96F63 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC97Q96F63 AL645939.2-201ENST00000427340 991 ntBASIC16.75■□□□□ 0.27
CCDC97Q96F63 MKNK2P1-201ENST00000437526 628 ntBASIC16.75■□□□□ 0.27
CCDC97Q96F63 HCG4B-203ENST00000450128 991 ntBASIC16.75■□□□□ 0.27
CCDC97Q96F63 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC97Q96F63 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCDC97Q96F63 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CCDC97Q96F63 AC092364.2-202ENST00000597012 1073 ntBASIC16.75■□□□□ 0.27
CCDC97Q96F63 C20orf181-201ENST00000623918 480 ntBASIC16.75■□□□□ 0.27
CCDC97Q96F63 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC97Q96F63 KRT8P49-201ENST00000604166 1432 ntBASIC16.75■□□□□ 0.27
CCDC97Q96F63 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC97Q96F63 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CCDC97Q96F63 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC97Q96F63 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC97Q96F63 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC97Q96F63 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC97Q96F63 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC97Q96F63 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC97Q96F63 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CCDC97Q96F63 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC97Q96F63 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC97Q96F63 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC97Q96F63 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC97Q96F63 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC97Q96F63 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC97Q96F63 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC97Q96F63 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC97Q96F63 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC97Q96F63 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC97Q96F63 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCDC97Q96F63 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC97Q96F63 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC97Q96F63 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCDC97Q96F63 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC97Q96F63 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC97Q96F63 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC97Q96F63 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC97Q96F63 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC97Q96F63 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC97Q96F63 VN2R19P-201ENST00000442399 1052 ntBASIC16.74■□□□□ 0.27
CCDC97Q96F63 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCDC97Q96F63 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
CCDC97Q96F63 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC97Q96F63 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC97Q96F63 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC97Q96F63 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC97Q96F63 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCDC97Q96F63 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC97Q96F63 AC018845.2-201ENST00000568326 409 ntBASIC16.74■□□□□ 0.27
CCDC97Q96F63 MIR4469-201ENST00000583919 79 ntBASIC16.74■□□□□ 0.27
CCDC97Q96F63 AC010654.1-201ENST00000615722 808 ntBASIC16.74■□□□□ 0.27
CCDC97Q96F63 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC97Q96F63 GGTLC5P-201ENST00000617623 998 ntBASIC16.74■□□□□ 0.27
CCDC97Q96F63 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC97Q96F63 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCDC97Q96F63 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC97Q96F63 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC97Q96F63 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC97Q96F63 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
CCDC97Q96F63 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCDC97Q96F63 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC97Q96F63 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCDC97Q96F63 AL671710.1-201ENST00000610245 2349 ntBASIC16.74■□□□□ 0.27
CCDC97Q96F63 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC97Q96F63 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
CCDC97Q96F63 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC97Q96F63 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC97Q96F63 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC97Q96F63 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC97Q96F63 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC97Q96F63 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC97Q96F63 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC97Q96F63 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC97Q96F63 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC97Q96F63 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms