Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 AL589702.1-201ENST00000641229 1509 ntBASIC15.7■□□□□ 0.1
UBE2E3Q969T4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 TFAMP1-201ENST00000412727 736 ntBASIC15.7■□□□□ 0.1
UBE2E3Q969T4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 AL355306.1-201ENST00000415580 579 ntBASIC15.7■□□□□ 0.1
UBE2E3Q969T4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 POLD2P1-201ENST00000511220 997 ntBASIC15.7■□□□□ 0.1
UBE2E3Q969T4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 AC073389.1-201ENST00000595595 795 ntBASIC15.7■□□□□ 0.1
UBE2E3Q969T4 C20orf181-201ENST00000623918 480 ntBASIC15.7■□□□□ 0.1
UBE2E3Q969T4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
UBE2E3Q969T4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 MKNK2P1-201ENST00000437526 628 ntBASIC15.69■□□□□ 0.1
UBE2E3Q969T4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 PGAM5P1-201ENST00000518923 814 ntBASIC15.69■□□□□ 0.1
UBE2E3Q969T4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.69■□□□□ 0.1
UBE2E3Q969T4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 AC022188.1-201ENST00000620960 1664 ntBASIC15.69■□□□□ 0.1
UBE2E3Q969T4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E3Q969T4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E3Q969T4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.68■□□□□ 0.1
UBE2E3Q969T4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.68■□□□□ 0.1
UBE2E3Q969T4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.68■□□□□ 0.1
UBE2E3Q969T4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.68■□□□□ 0.1
UBE2E3Q969T4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E3Q969T4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E3Q969T4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E3Q969T4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
UBE2E3Q969T4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
UBE2E3Q969T4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.68■□□□□ 0.1
UBE2E3Q969T4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
UBE2E3Q969T4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
UBE2E3Q969T4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E3Q969T4 YBX2P1-201ENST00000394192 760 ntBASIC15.68■□□□□ 0.1
UBE2E3Q969T4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms