Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SEMA4DQ92854 AC112504.1-201ENST00000623415 1841 ntBASIC17.52■□□□□ 0.4
SEMA4DQ92854 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SEMA4DQ92854 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SEMA4DQ92854 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.52■□□□□ 0.4
SEMA4DQ92854 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SEMA4DQ92854 LINC02447-202ENST00000501888 2146 ntBASIC17.52■□□□□ 0.4
SEMA4DQ92854 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
SEMA4DQ92854 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.52■□□□□ 0.4
SEMA4DQ92854 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.52■□□□□ 0.4
SEMA4DQ92854 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SEMA4DQ92854 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.52■□□□□ 0.4
SEMA4DQ92854 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.52■□□□□ 0.4
SEMA4DQ92854 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.52■□□□□ 0.4
SEMA4DQ92854 AL365330.1-201ENST00000607459 531 ntBASIC17.52■□□□□ 0.4
SEMA4DQ92854 AC134684.3-201ENST00000641758 218 ntBASIC17.52■□□□□ 0.4
SEMA4DQ92854 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
SEMA4DQ92854 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SEMA4DQ92854 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.52■□□□□ 0.4
SEMA4DQ92854 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SEMA4DQ92854 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SEMA4DQ92854 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.52■□□□□ 0.4
SEMA4DQ92854 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SEMA4DQ92854 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
SEMA4DQ92854 AC008677.1-201ENST00000519230 1561 ntBASIC17.52■□□□□ 0.39
SEMA4DQ92854 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SEMA4DQ92854 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SEMA4DQ92854 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SEMA4DQ92854 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.52■□□□□ 0.39
SEMA4DQ92854 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.51■□□□□ 0.39
SEMA4DQ92854 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEMA4DQ92854 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEMA4DQ92854 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.51■□□□□ 0.39
SEMA4DQ92854 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEMA4DQ92854 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.51■□□□□ 0.39
SEMA4DQ92854 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.51■□□□□ 0.39
SEMA4DQ92854 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEMA4DQ92854 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SEMA4DQ92854 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEMA4DQ92854 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
SEMA4DQ92854 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
SEMA4DQ92854 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SEMA4DQ92854 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SEMA4DQ92854 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEMA4DQ92854 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.51■□□□□ 0.39
SEMA4DQ92854 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEMA4DQ92854 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.51■□□□□ 0.39
SEMA4DQ92854 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEMA4DQ92854 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.51■□□□□ 0.39
SEMA4DQ92854 MIR648-201ENST00000385046 94 ntBASIC17.51■□□□□ 0.39
SEMA4DQ92854 KRT18P13-201ENST00000400056 1290 ntBASIC17.51■□□□□ 0.39
SEMA4DQ92854 AL627223.1-201ENST00000416693 442 ntBASIC17.51■□□□□ 0.39
SEMA4DQ92854 AC005237.2-201ENST00000434368 219 ntBASIC17.51■□□□□ 0.39
SEMA4DQ92854 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SEMA4DQ92854 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.51■□□□□ 0.39
SEMA4DQ92854 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.51■□□□□ 0.39
SEMA4DQ92854 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SEMA4DQ92854 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.51■□□□□ 0.39
SEMA4DQ92854 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.51■□□□□ 0.39
SEMA4DQ92854 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SEMA4DQ92854 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEMA4DQ92854 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SEMA4DQ92854 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.51■□□□□ 0.39
SEMA4DQ92854 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEMA4DQ92854 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SEMA4DQ92854 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SEMA4DQ92854 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SEMA4DQ92854 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.51■□□□□ 0.39
SEMA4DQ92854 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEMA4DQ92854 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEMA4DQ92854 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.51■□□□□ 0.39
SEMA4DQ92854 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEMA4DQ92854 AC007950.2-201ENST00000615045 2347 ntBASIC17.5■□□□□ 0.39
SEMA4DQ92854 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEMA4DQ92854 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEMA4DQ92854 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SEMA4DQ92854 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEMA4DQ92854 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEMA4DQ92854 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEMA4DQ92854 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.5■□□□□ 0.39
SEMA4DQ92854 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.5■□□□□ 0.39
SEMA4DQ92854 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SEMA4DQ92854 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.5■□□□□ 0.39
SEMA4DQ92854 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.5■□□□□ 0.39
SEMA4DQ92854 AP3S2-216ENST00000617003 1561 ntBASIC17.5■□□□□ 0.39
SEMA4DQ92854 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.5■□□□□ 0.39
SEMA4DQ92854 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEMA4DQ92854 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEMA4DQ92854 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEMA4DQ92854 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.5■□□□□ 0.39
SEMA4DQ92854 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SEMA4DQ92854 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.5■□□□□ 0.39
SEMA4DQ92854 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SEMA4DQ92854 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.5■□□□□ 0.39
SEMA4DQ92854 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEMA4DQ92854 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.5■□□□□ 0.39
SEMA4DQ92854 GPS2P2-201ENST00000430745 888 ntBASIC17.5■□□□□ 0.39
SEMA4DQ92854 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SEMA4DQ92854 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
SEMA4DQ92854 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms