Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 RPL13AP23-201ENST00000480739 586 ntBASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRAF3IP1Q8TDR0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 TSPY26P-202ENST00000565928 3884 ntBASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 AC007967.2-201ENST00000432613 625 ntBASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 AC034105.1-201ENST00000563488 319 ntBASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 AC018845.2-201ENST00000568326 409 ntBASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 AL009183.1-201ENST00000603760 355 ntBASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 AC004877.2-201ENST00000623941 599 ntBASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 U82695.1-201ENST00000635752 1889 ntBASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP1Q8TDR0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 AC025580.3-201ENST00000617932 1424 ntBASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms