Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 MIR648-201ENST00000385046 94 ntBASIC15.29■□□□□ 0.04
NUP43Q8NFH3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 AC099522.2-201ENST00000607001 744 ntBASIC15.28■□□□□ 0.04
NUP43Q8NFH3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 AC010491.1-201ENST00000563101 2797 ntBASIC15.28■□□□□ 0.04
NUP43Q8NFH3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUP43Q8NFH3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
NUP43Q8NFH3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.27■□□□□ 0.04
NUP43Q8NFH3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.27■□□□□ 0.04
NUP43Q8NFH3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.27■□□□□ 0.04
NUP43Q8NFH3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.27■□□□□ 0.04
NUP43Q8NFH3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NUP43Q8NFH3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
NUP43Q8NFH3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
NUP43Q8NFH3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
NUP43Q8NFH3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
NUP43Q8NFH3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.27■□□□□ 0.04
NUP43Q8NFH3 PMS2P7-201ENST00000506558 1336 ntBASIC15.27■□□□□ 0.04
NUP43Q8NFH3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NUP43Q8NFH3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NUP43Q8NFH3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NUP43Q8NFH3 AL022342.1-201ENST00000400363 863 ntBASIC15.27■□□□□ 0.04
NUP43Q8NFH3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.27■□□□□ 0.04
NUP43Q8NFH3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NUP43Q8NFH3 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.27■□□□□ 0.04
NUP43Q8NFH3 PRYP6-201ENST00000514804 343 ntBASIC15.27■□□□□ 0.04
NUP43Q8NFH3 KRT18P58-201ENST00000527480 1120 ntBASIC15.27■□□□□ 0.04
NUP43Q8NFH3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.27■□□□□ 0.04
NUP43Q8NFH3 AC040169.1-201ENST00000565382 521 ntBASIC15.27■□□□□ 0.04
NUP43Q8NFH3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.27■□□□□ 0.04
NUP43Q8NFH3 RARRES2P8-201ENST00000566335 367 ntBASIC15.27■□□□□ 0.04
NUP43Q8NFH3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NUP43Q8NFH3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NUP43Q8NFH3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NUP43Q8NFH3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
NUP43Q8NFH3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms