Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL9Q8NET4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RTL9Q8NET4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.93■□□□□ 0.78
RTL9Q8NET4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTL9Q8NET4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTL9Q8NET4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL9Q8NET4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTL9Q8NET4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RTL9Q8NET4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL9Q8NET4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL9Q8NET4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.93■□□□□ 0.78
RTL9Q8NET4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL9Q8NET4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.93■□□□□ 0.78
RTL9Q8NET4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL9Q8NET4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.93■□□□□ 0.78
RTL9Q8NET4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL9Q8NET4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTL9Q8NET4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.93■□□□□ 0.78
RTL9Q8NET4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL9Q8NET4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL9Q8NET4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RTL9Q8NET4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL9Q8NET4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.93■□□□□ 0.78
RTL9Q8NET4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.93■□□□□ 0.78
RTL9Q8NET4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL9Q8NET4 AL512384.1-201ENST00000406683 331 ntBASIC19.93■□□□□ 0.78
RTL9Q8NET4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTL9Q8NET4 AP006294.1-201ENST00000415407 339 ntBASIC19.93■□□□□ 0.78
RTL9Q8NET4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RTL9Q8NET4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL9Q8NET4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.93■□□□□ 0.78
RTL9Q8NET4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.93■□□□□ 0.78
RTL9Q8NET4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL9Q8NET4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL9Q8NET4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.93■□□□□ 0.78
RTL9Q8NET4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL9Q8NET4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RTL9Q8NET4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RTL9Q8NET4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL9Q8NET4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL9Q8NET4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL9Q8NET4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RTL9Q8NET4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.92■□□□□ 0.78
RTL9Q8NET4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RTL9Q8NET4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL9Q8NET4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RTL9Q8NET4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.92■□□□□ 0.78
RTL9Q8NET4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL9Q8NET4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL9Q8NET4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RTL9Q8NET4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.92■□□□□ 0.78
RTL9Q8NET4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RTL9Q8NET4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL9Q8NET4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.92■□□□□ 0.78
RTL9Q8NET4 MIR1909-201ENST00000411312 80 ntBASIC19.92■□□□□ 0.78
RTL9Q8NET4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.92■□□□□ 0.78
RTL9Q8NET4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.92■□□□□ 0.78
RTL9Q8NET4 ACA64.2-201ENST00000459014 129 ntBASIC19.92■□□□□ 0.78
RTL9Q8NET4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.92■□□□□ 0.78
RTL9Q8NET4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
RTL9Q8NET4 AC243562.2-201ENST00000561247 970 ntBASIC19.92■□□□□ 0.78
RTL9Q8NET4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RTL9Q8NET4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.92■□□□□ 0.78
RTL9Q8NET4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.92■□□□□ 0.78
RTL9Q8NET4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RTL9Q8NET4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL9Q8NET4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.92■□□□□ 0.78
RTL9Q8NET4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.92■□□□□ 0.78
RTL9Q8NET4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL9Q8NET4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.91■□□□□ 0.78
RTL9Q8NET4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
RTL9Q8NET4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.91■□□□□ 0.78
RTL9Q8NET4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL9Q8NET4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.91■□□□□ 0.78
RTL9Q8NET4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTL9Q8NET4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTL9Q8NET4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RTL9Q8NET4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTL9Q8NET4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.91■□□□□ 0.78
RTL9Q8NET4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.91■□□□□ 0.78
RTL9Q8NET4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.91■□□□□ 0.78
RTL9Q8NET4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RTL9Q8NET4 AZGP1P1-201ENST00000411909 902 ntBASIC19.91■□□□□ 0.78
RTL9Q8NET4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.91■□□□□ 0.78
RTL9Q8NET4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTL9Q8NET4 RN7SL752P-201ENST00000463779 287 ntBASIC19.91■□□□□ 0.78
RTL9Q8NET4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.91■□□□□ 0.78
RTL9Q8NET4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.91■□□□□ 0.78
RTL9Q8NET4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
RTL9Q8NET4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.91■□□□□ 0.78
RTL9Q8NET4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL9Q8NET4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL9Q8NET4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL9Q8NET4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL9Q8NET4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RTL9Q8NET4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RTL9Q8NET4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.91■□□□□ 0.78
RTL9Q8NET4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTL9Q8NET4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTL9Q8NET4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms