Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 AL136982.4-201ENST00000437689 1740 ntBASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 GNAQP1-201ENST00000444815 1067 ntBASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 RN7SL618P-201ENST00000477850 296 ntBASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 AL033527.5-202ENST00000641632 1098 ntBASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 AC011676.5-201ENST00000624864 2660 ntBASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC38A9Q8NBW4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 AL139010.1-201ENST00000454878 894 ntBASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 SPDYE18-201ENST00000510091 1050 ntBASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 MIR4321-201ENST00000592276 80 ntBASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 AC063926.2-201ENST00000623766 1308 ntBASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 AC007541.1-201ENST00000570282 1469 ntBASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.31■□□□□ 0.04
SLC38A9Q8NBW4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 AGGF1P2-201ENST00000426656 2106 ntBASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 BTBD7P1-201ENST00000447253 1453 ntBASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms