Protein–RNA interactions for Protein: Q8N6N3

C1orf52, UPF0690 protein C1orf52, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf52Q8N6N3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 AC093724.1-201ENST00000448659 1027 ntBASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 AC068137.2-201ENST00000605408 478 ntBASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 AL513190.1-201ENST00000621254 727 ntBASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.65■□□□□ 0.1
C1orf52Q8N6N3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 RNA5SP416-201ENST00000516838 111 ntBASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 PDPK2P-202ENST00000562415 1191 ntBASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 AC140113.2-201ENST00000604370 208 ntBASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 LINC02447-202ENST00000501888 2146 ntBASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
C1orf52Q8N6N3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C1orf52Q8N6N3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.63■□□□□ 0.09
C1orf52Q8N6N3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C1orf52Q8N6N3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.63■□□□□ 0.09
C1orf52Q8N6N3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.63■□□□□ 0.09
C1orf52Q8N6N3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.63■□□□□ 0.09
C1orf52Q8N6N3 CDC14C-201ENST00000428251 1719 ntBASIC15.63■□□□□ 0.09
C1orf52Q8N6N3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C1orf52Q8N6N3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
C1orf52Q8N6N3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.63■□□□□ 0.09
C1orf52Q8N6N3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C1orf52Q8N6N3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C1orf52Q8N6N3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
C1orf52Q8N6N3 MIR648-201ENST00000385046 94 ntBASIC15.63■□□□□ 0.09
C1orf52Q8N6N3 MED15P5-201ENST00000423150 992 ntBASIC15.63■□□□□ 0.09
C1orf52Q8N6N3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.63■□□□□ 0.09
C1orf52Q8N6N3 AC074386.1-202ENST00000463561 864 ntBASIC15.63■□□□□ 0.09
C1orf52Q8N6N3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
C1orf52Q8N6N3 AC106730.1-201ENST00000566722 1090 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms