Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIX5Q8N196 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIX5Q8N196 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIX5Q8N196 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIX5Q8N196 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.69■□□□□ 0.26
SIX5Q8N196 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SIX5Q8N196 AC084018.2-201ENST00000613093 2607 ntBASIC16.69■□□□□ 0.26
SIX5Q8N196 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIX5Q8N196 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SIX5Q8N196 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SIX5Q8N196 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIX5Q8N196 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
SIX5Q8N196 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SIX5Q8N196 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SIX5Q8N196 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.69■□□□□ 0.26
SIX5Q8N196 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SIX5Q8N196 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIX5Q8N196 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.69■□□□□ 0.26
SIX5Q8N196 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.69■□□□□ 0.26
SIX5Q8N196 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.69■□□□□ 0.26
SIX5Q8N196 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.69■□□□□ 0.26
SIX5Q8N196 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.69■□□□□ 0.26
SIX5Q8N196 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.69■□□□□ 0.26
SIX5Q8N196 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.69■□□□□ 0.26
SIX5Q8N196 TMEM261P1-201ENST00000604899 340 ntBASIC16.69■□□□□ 0.26
SIX5Q8N196 AC026979.3-201ENST00000607315 403 ntBASIC16.69■□□□□ 0.26
SIX5Q8N196 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.69■□□□□ 0.26
SIX5Q8N196 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.69■□□□□ 0.26
SIX5Q8N196 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SIX5Q8N196 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.69■□□□□ 0.26
SIX5Q8N196 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.69■□□□□ 0.26
SIX5Q8N196 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIX5Q8N196 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.69■□□□□ 0.26
SIX5Q8N196 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SIX5Q8N196 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SIX5Q8N196 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.69■□□□□ 0.26
SIX5Q8N196 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIX5Q8N196 AL671710.1-201ENST00000610245 2349 ntBASIC16.69■□□□□ 0.26
SIX5Q8N196 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIX5Q8N196 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIX5Q8N196 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.69■□□□□ 0.26
SIX5Q8N196 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.69■□□□□ 0.26
SIX5Q8N196 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIX5Q8N196 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIX5Q8N196 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIX5Q8N196 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SIX5Q8N196 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SIX5Q8N196 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.68■□□□□ 0.26
SIX5Q8N196 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.68■□□□□ 0.26
SIX5Q8N196 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.68■□□□□ 0.26
SIX5Q8N196 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SIX5Q8N196 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.68■□□□□ 0.26
SIX5Q8N196 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SIX5Q8N196 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SIX5Q8N196 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SIX5Q8N196 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIX5Q8N196 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.68■□□□□ 0.26
SIX5Q8N196 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.68■□□□□ 0.26
SIX5Q8N196 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.68■□□□□ 0.26
SIX5Q8N196 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.68■□□□□ 0.26
SIX5Q8N196 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.68■□□□□ 0.26
SIX5Q8N196 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SIX5Q8N196 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.68■□□□□ 0.26
SIX5Q8N196 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SIX5Q8N196 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.68■□□□□ 0.26
SIX5Q8N196 MIR8072-201ENST00000614241 80 ntBASIC16.68■□□□□ 0.26
SIX5Q8N196 MIR6069-201ENST00000620069 79 ntBASIC16.68■□□□□ 0.26
SIX5Q8N196 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.68■□□□□ 0.26
SIX5Q8N196 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIX5Q8N196 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SIX5Q8N196 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SIX5Q8N196 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIX5Q8N196 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIX5Q8N196 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SIX5Q8N196 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.68■□□□□ 0.26
SIX5Q8N196 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SIX5Q8N196 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX5Q8N196 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.67■□□□□ 0.26
SIX5Q8N196 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.67■□□□□ 0.26
SIX5Q8N196 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX5Q8N196 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SIX5Q8N196 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX5Q8N196 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX5Q8N196 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
SIX5Q8N196 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX5Q8N196 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIX5Q8N196 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX5Q8N196 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SIX5Q8N196 AC092933.1-201ENST00000393644 945 ntBASIC16.67■□□□□ 0.26
SIX5Q8N196 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SIX5Q8N196 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
SIX5Q8N196 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.67■□□□□ 0.26
SIX5Q8N196 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.67■□□□□ 0.26
SIX5Q8N196 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX5Q8N196 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
SIX5Q8N196 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
SIX5Q8N196 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.67■□□□□ 0.26
SIX5Q8N196 AC024267.1-201ENST00000582320 895 ntBASIC16.67■□□□□ 0.26
SIX5Q8N196 BTNL10-201ENST00000595971 695 ntBASIC16.67■□□□□ 0.26
SIX5Q8N196 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms