Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 TMEM14DP-201ENST00000422205 345 ntBASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 AC022210.1-201ENST00000449856 793 ntBASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 RRP7BP-205ENST00000566851 833 ntBASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 WFDC1-204ENST00000613603 549 ntBASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 AL136982.4-201ENST00000437689 1740 ntBASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS3Q8IXF0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 CYP4F24P-201ENST00000586049 1580 ntBASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 HIST3H2BA-201ENST00000436555 524 ntBASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 MIR6799-201ENST00000620297 69 ntBASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NPAS3Q8IXF0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms