Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 AC023141.5-201ENST00000458585 616 ntBASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 MTHFR-217ENST00000641820 1569 ntBASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 GPS2P2-201ENST00000430745 888 ntBASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 RBPMS2P1-201ENST00000437762 623 ntBASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 DOC2GP-204ENST00000639052 2548 ntBASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 AP3S2-216ENST00000617003 1561 ntBASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.15■□□□□ 0.34
SCUBE3Q8IX30 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SCUBE3Q8IX30 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.14■□□□□ 0.34
SCUBE3Q8IX30 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
SCUBE3Q8IX30 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SCUBE3Q8IX30 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.14■□□□□ 0.34
SCUBE3Q8IX30 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 ALG1L8P-201ENST00000533887 760 ntBASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 AC009093.7-201ENST00000623853 1223 ntBASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms