Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 AC104109.2-201ENST00000602919 1418 ntBASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 AC023141.13-201ENST00000604991 943 ntBASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC83Q8IWF9 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 AC025580.3-201ENST00000617932 1424 ntBASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 AC093724.1-201ENST00000448659 1027 ntBASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 AC079776.4-201ENST00000511039 504 ntBASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 AC109635.5-201ENST00000533593 962 ntBASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 AC034105.1-201ENST00000563488 319 ntBASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 AC016027.1-202ENST00000607927 1699 ntBASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 BCAR1-209ENST00000546196 1340 ntBASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC83Q8IWF9 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 KRT18P2-201ENST00000447938 1258 ntBASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 AC064836.3-201ENST00000607928 673 ntBASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 AC004877.2-201ENST00000623941 599 ntBASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC83Q8IWF9 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms