Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 PTCHD3P3-201ENST00000403073 906 ntBASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 KRT16P4-201ENST00000453883 522 ntBASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 AC139887.3-201ENST00000568585 713 ntBASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 AL139288.1-201ENST00000623748 933 ntBASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 PGM5P2-202ENST00000637225 1043 ntBASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 TNRC18P2-201ENST00000417666 2714 ntBASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NUDCD3Q8IVD9 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 AC099063.4-201ENST00000641099 1602 ntBASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 SLC25A6P2-201ENST00000497974 877 ntBASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 AC106795.1-205ENST00000512851 1056 ntBASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NUDCD3Q8IVD9 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NUDCD3Q8IVD9 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.27■□□□□ 0.19
NUDCD3Q8IVD9 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.27■□□□□ 0.19
NUDCD3Q8IVD9 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NUDCD3Q8IVD9 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
NUDCD3Q8IVD9 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NUDCD3Q8IVD9 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.19
NUDCD3Q8IVD9 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NUDCD3Q8IVD9 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
NUDCD3Q8IVD9 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUDCD3Q8IVD9 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms