Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 AC006486.2-201ENST00000624246 2199 ntBASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 ARMC10P1-201ENST00000313754 855 ntBASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRRTM1Q86UE6 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 AC138894.3-201ENST00000603787 634 ntBASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 AC068587.6-202ENST00000641839 5619 ntBASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 NORAD-201ENST00000565493 5339 ntBASIC14.21□□□□□ -0.13
LRRTM1Q86UE6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.21□□□□□ -0.14
LRRTM1Q86UE6 AC006504.4-201ENST00000592118 1568 ntBASIC14.21□□□□□ -0.14
LRRTM1Q86UE6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LRRTM1Q86UE6 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LRRTM1Q86UE6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LRRTM1Q86UE6 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms