Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 FAM21FP-201ENST00000426241 1131 ntBASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 ACTG1P3-201ENST00000431775 1114 ntBASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 AL139010.1-201ENST00000454878 894 ntBASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 AP001889.1-201ENST00000525414 633 ntBASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 AL359711.2-201ENST00000563105 872 ntBASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 KC6-205ENST00000599934 556 ntTSL 4 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 AC005622.1-201ENST00000636801 1703 ntBASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 GGT3P-204ENST00000453783 1664 ntBASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 OLR1-203ENST00000432556 950 ntTSL 2 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 RN7SL399P-201ENST00000471648 279 ntBASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 AC005702.4-201ENST00000618393 416 ntBASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 HLA-A-202ENST00000376806 1854 ntBASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 AC016629.1-201ENST00000596579 586 ntBASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 AC124283.3-201ENST00000570869 594 ntBASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13BQ7Z7G8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms