Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
KRT28Q7Z3Y7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.76■■□□□ 1.07
KRT28Q7Z3Y7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.76■■□□□ 1.07
KRT28Q7Z3Y7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KRT28Q7Z3Y7 MIR326-201ENST00000362220 95 ntBASIC21.76■■□□□ 1.07
KRT28Q7Z3Y7 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KRT28Q7Z3Y7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC21.76■■□□□ 1.07
KRT28Q7Z3Y7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
KRT28Q7Z3Y7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC21.76■■□□□ 1.07
KRT28Q7Z3Y7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
KRT28Q7Z3Y7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
KRT28Q7Z3Y7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC21.76■■□□□ 1.07
KRT28Q7Z3Y7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC21.76■■□□□ 1.07
KRT28Q7Z3Y7 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC21.76■■□□□ 1.07
KRT28Q7Z3Y7 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC21.76■■□□□ 1.07
KRT28Q7Z3Y7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KRT28Q7Z3Y7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT28Q7Z3Y7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
KRT28Q7Z3Y7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
KRT28Q7Z3Y7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.76■■□□□ 1.07
KRT28Q7Z3Y7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT28Q7Z3Y7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
KRT28Q7Z3Y7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 OLR1-203ENST00000432556 950 ntTSL 2 BASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 RNA5SP423-201ENST00000517127 109 ntBASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 AC243562.2-201ENST00000561247 970 ntBASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 GGT3P-204ENST00000453783 1664 ntBASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KRT28Q7Z3Y7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 USP40-206ENST00000443711 628 ntTSL 2 BASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 FAM86HP-204ENST00000513466 959 ntBASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 GNRHR2-203ENST00000581100 1187 ntBASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 ABBA01031663.1-201ENST00000635630 790 ntBASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KRT28Q7Z3Y7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms