Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 GGT3P-204ENST00000453783 1664 ntBASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 AC016027.1-202ENST00000607927 1699 ntBASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 AP000523.1-201ENST00000398242 1049 ntBASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 GXYLT1P6-201ENST00000456472 1187 ntBASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP4Q6PIL6 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP4Q6PIL6 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP4Q6PIL6 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP4Q6PIL6 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.71□□□□□ -0.38
KCNIP4Q6PIL6 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP4Q6PIL6 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP4Q6PIL6 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.71□□□□□ -0.38
KCNIP4Q6PIL6 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP4Q6PIL6 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP4Q6PIL6 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP4Q6PIL6 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP4Q6PIL6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.71□□□□□ -0.38
KCNIP4Q6PIL6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP4Q6PIL6 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP4Q6PIL6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP4Q6PIL6 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
KCNIP4Q6PIL6 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 AP003041.3-201ENST00000527151 707 ntBASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 AC010653.2-201ENST00000623505 997 ntBASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms