Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 AC244107.1-201ENST00000442033 332 ntBASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 SPDYE18-201ENST00000510091 1050 ntBASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 AC078925.2-201ENST00000624013 1973 ntBASIC18.28■□□□□ 0.52
CCDC62Q6P9F0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CCDC62Q6P9F0 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CCDC62Q6P9F0 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC62Q6P9F0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC62Q6P9F0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC62Q6P9F0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC62Q6P9F0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC62Q6P9F0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CCDC62Q6P9F0 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC62Q6P9F0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CCDC62Q6P9F0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC62Q6P9F0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC62Q6P9F0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC62Q6P9F0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC62Q6P9F0 AL139010.1-201ENST00000454878 894 ntBASIC18.27■□□□□ 0.52
CCDC62Q6P9F0 SERBP1P3-201ENST00000459980 809 ntBASIC18.27■□□□□ 0.52
CCDC62Q6P9F0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC62Q6P9F0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC62Q6P9F0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC62Q6P9F0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC62Q6P9F0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC62Q6P9F0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC62Q6P9F0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CCDC62Q6P9F0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC62Q6P9F0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC62Q6P9F0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC62Q6P9F0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC62Q6P9F0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC62Q6P9F0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CCDC62Q6P9F0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC62Q6P9F0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CCDC62Q6P9F0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC62Q6P9F0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC62Q6P9F0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CCDC62Q6P9F0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 U82695.1-201ENST00000635752 1889 ntBASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 NFIC-211ENST00000641145 8399 ntBASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 DFFBP1-201ENST00000433250 979 ntBASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC62Q6P9F0 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms