Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 AC041040.2-201ENST00000622926 2899 ntBASIC15.44■□□□□ 0.06
LPCAT4Q643R3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 MIR662-201ENST00000384847 95 ntBASIC15.44■□□□□ 0.06
LPCAT4Q643R3 FAM8A6P-201ENST00000407496 1135 ntBASIC15.44■□□□□ 0.06
LPCAT4Q643R3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 AL390719.2-201ENST00000606993 987 ntBASIC15.44■□□□□ 0.06
LPCAT4Q643R3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 AC073592.5-201ENST00000624854 528 ntBASIC15.44■□□□□ 0.06
LPCAT4Q643R3 AC141257.4-201ENST00000634557 245 ntBASIC15.44■□□□□ 0.06
LPCAT4Q643R3 AC136944.6-201ENST00000634818 245 ntBASIC15.44■□□□□ 0.06
LPCAT4Q643R3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LPCAT4Q643R3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 AC013726.1-201ENST00000563747 2285 ntBASIC15.43■□□□□ 0.06
LPCAT4Q643R3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 TSPY15P-201ENST00000457163 923 ntBASIC15.43■□□□□ 0.06
LPCAT4Q643R3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 AC005336.2-201ENST00000593183 939 ntBASIC15.43■□□□□ 0.06
LPCAT4Q643R3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 AD001527.2-201ENST00000622994 785 ntBASIC15.43■□□□□ 0.06
LPCAT4Q643R3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms