Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 AKAP8P1-201ENST00000434743 1349 ntBASIC19.51■□□□□ 0.71
RNF20Q5VTR2 PMS2P7-201ENST00000506558 1336 ntBASIC19.51■□□□□ 0.71
RNF20Q5VTR2 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 AC091812.2-201ENST00000619081 385 ntBASIC19.5■□□□□ 0.71
RNF20Q5VTR2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF20Q5VTR2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 MIR574-201ENST00000385209 96 ntBASIC19.49■□□□□ 0.71
RNF20Q5VTR2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF20Q5VTR2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 AL589702.1-201ENST00000641229 1509 ntBASIC19.48■□□□□ 0.71
RNF20Q5VTR2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF20Q5VTR2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms