Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC074051.2-201ENST00000565115 352 ntBASIC14.62□□□□□ -0.07
SCN1BQ07699 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.62□□□□□ -0.07
SCN1BQ07699 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SCN1BQ07699 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
SCN1BQ07699 STK25P1-201ENST00000585406 838 ntBASIC14.62□□□□□ -0.07
SCN1BQ07699 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SCN1BQ07699 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.62□□□□□ -0.07
SCN1BQ07699 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SCN1BQ07699 AL359258.3-201ENST00000622910 2331 ntBASIC14.62□□□□□ -0.07
SCN1BQ07699 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
SCN1BQ07699 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SCN1BQ07699 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SCN1BQ07699 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SCN1BQ07699 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.62□□□□□ -0.07
SCN1BQ07699 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SCN1BQ07699 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SCN1BQ07699 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SCN1BQ07699 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SCN1BQ07699 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SCN1BQ07699 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SCN1BQ07699 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SCN1BQ07699 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SCN1BQ07699 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SCN1BQ07699 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SCN1BQ07699 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.61□□□□□ -0.07
SCN1BQ07699 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
SCN1BQ07699 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.61□□□□□ -0.07
SCN1BQ07699 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.61□□□□□ -0.07
SCN1BQ07699 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 ARMC10P1-201ENST00000313754 855 ntBASIC14.61□□□□□ -0.07
SCN1BQ07699 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.61□□□□□ -0.07
SCN1BQ07699 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.61□□□□□ -0.07
SCN1BQ07699 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SCN1BQ07699 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.61□□□□□ -0.07
SCN1BQ07699 KLF4P1-201ENST00000412782 1185 ntBASIC14.61□□□□□ -0.07
SCN1BQ07699 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.61□□□□□ -0.07
SCN1BQ07699 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SCN1BQ07699 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.61□□□□□ -0.07
SCN1BQ07699 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.61□□□□□ -0.07
SCN1BQ07699 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.61□□□□□ -0.07
SCN1BQ07699 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.61□□□□□ -0.07
SCN1BQ07699 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.61□□□□□ -0.07
SCN1BQ07699 TPSP2-201ENST00000561760 610 ntBASIC14.61□□□□□ -0.07
SCN1BQ07699 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.61□□□□□ -0.07
SCN1BQ07699 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.61□□□□□ -0.07
SCN1BQ07699 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.61□□□□□ -0.07
SCN1BQ07699 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SCN1BQ07699 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SCN1BQ07699 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.61□□□□□ -0.07
SCN1BQ07699 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.61□□□□□ -0.07
SCN1BQ07699 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
SCN1BQ07699 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 NSUN5P1-202ENST00000421140 1535 ntBASIC14.61□□□□□ -0.07
SCN1BQ07699 NSUN5P2-203ENST00000457352 1529 ntBASIC14.61□□□□□ -0.07
SCN1BQ07699 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SCN1BQ07699 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SCN1BQ07699 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SCN1BQ07699 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
SCN1BQ07699 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCN1BQ07699 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SCN1BQ07699 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.6□□□□□ -0.07
SCN1BQ07699 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCN1BQ07699 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.6□□□□□ -0.07
SCN1BQ07699 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SCN1BQ07699 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCN1BQ07699 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCN1BQ07699 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SCN1BQ07699 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SCN1BQ07699 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCN1BQ07699 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SCN1BQ07699 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCN1BQ07699 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCN1BQ07699 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.6□□□□□ -0.07
SCN1BQ07699 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
SCN1BQ07699 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.6□□□□□ -0.07
SCN1BQ07699 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
SCN1BQ07699 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms