Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.1□□□□□ -0.15
ACTBP60709 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ACTBP60709 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.1□□□□□ -0.15
ACTBP60709 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ACTBP60709 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.1□□□□□ -0.15
ACTBP60709 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.1□□□□□ -0.15
ACTBP60709 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.1□□□□□ -0.15
ACTBP60709 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.1□□□□□ -0.15
ACTBP60709 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.1□□□□□ -0.15
ACTBP60709 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.1□□□□□ -0.15
ACTBP60709 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.1□□□□□ -0.15
ACTBP60709 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.1□□□□□ -0.15
ACTBP60709 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.1□□□□□ -0.15
ACTBP60709 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.1□□□□□ -0.15
ACTBP60709 BNIP3P18-201ENST00000593976 575 ntBASIC14.1□□□□□ -0.15
ACTBP60709 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.1□□□□□ -0.15
ACTBP60709 TERC-201ENST00000602385 541 ntBASIC14.1□□□□□ -0.15
ACTBP60709 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.1□□□□□ -0.15
ACTBP60709 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.1□□□□□ -0.15
ACTBP60709 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
ACTBP60709 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.1□□□□□ -0.15
ACTBP60709 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ACTBP60709 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ACTBP60709 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
ACTBP60709 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.1□□□□□ -0.15
ACTBP60709 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.1□□□□□ -0.15
ACTBP60709 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.1□□□□□ -0.15
ACTBP60709 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.09□□□□□ -0.15
ACTBP60709 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.09□□□□□ -0.15
ACTBP60709 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ACTBP60709 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
ACTBP60709 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.09□□□□□ -0.15
ACTBP60709 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
ACTBP60709 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.09□□□□□ -0.15
ACTBP60709 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.09□□□□□ -0.15
ACTBP60709 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.09□□□□□ -0.15
ACTBP60709 AC099336.1-202ENST00000602961 463 ntBASIC14.09□□□□□ -0.15
ACTBP60709 AC016027.1-202ENST00000607927 1699 ntBASIC14.09□□□□□ -0.15
ACTBP60709 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ACTBP60709 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
ACTBP60709 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.09□□□□□ -0.15
ACTBP60709 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ACTBP60709 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.09□□□□□ -0.15
ACTBP60709 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.09□□□□□ -0.15
ACTBP60709 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.09□□□□□ -0.15
ACTBP60709 GPAA1P2-202ENST00000606848 1787 ntBASIC14.09□□□□□ -0.15
ACTBP60709 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ACTBP60709 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ACTBP60709 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
ACTBP60709 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
ACTBP60709 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
ACTBP60709 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.08□□□□□ -0.15
ACTBP60709 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ACTBP60709 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
ACTBP60709 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ACTBP60709 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ACTBP60709 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.08□□□□□ -0.16
ACTBP60709 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms