Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
GFRA1P56159 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
GFRA1P56159 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.57□□□□□ -0.08
GFRA1P56159 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.57□□□□□ -0.08
GFRA1P56159 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.57□□□□□ -0.08
GFRA1P56159 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.56□□□□□ -0.08
GFRA1P56159 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.56□□□□□ -0.08
GFRA1P56159 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
GFRA1P56159 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.56□□□□□ -0.08
GFRA1P56159 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.56□□□□□ -0.08
GFRA1P56159 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
GFRA1P56159 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.56□□□□□ -0.08
GFRA1P56159 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
GFRA1P56159 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
GFRA1P56159 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
GFRA1P56159 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.56□□□□□ -0.08
GFRA1P56159 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.56□□□□□ -0.08
GFRA1P56159 AL512638.1-201ENST00000457493 794 ntBASIC14.56□□□□□ -0.08
GFRA1P56159 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.56□□□□□ -0.08
GFRA1P56159 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.56□□□□□ -0.08
GFRA1P56159 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.56□□□□□ -0.08
GFRA1P56159 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.56□□□□□ -0.08
GFRA1P56159 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.56□□□□□ -0.08
GFRA1P56159 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.56□□□□□ -0.08
GFRA1P56159 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.56□□□□□ -0.08
GFRA1P56159 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 AC087499.5-201ENST00000452760 1342 ntBASIC14.56□□□□□ -0.08
GFRA1P56159 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 KRT8P12-202ENST00000472924 1397 ntBASIC14.56□□□□□ -0.08
GFRA1P56159 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.56□□□□□ -0.08
GFRA1P56159 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.56□□□□□ -0.08
GFRA1P56159 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GFRA1P56159 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
GFRA1P56159 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
GFRA1P56159 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.55□□□□□ -0.08
GFRA1P56159 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GFRA1P56159 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.55□□□□□ -0.08
GFRA1P56159 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.55□□□□□ -0.08
GFRA1P56159 AL136982.4-201ENST00000437689 1740 ntBASIC14.55□□□□□ -0.08
GFRA1P56159 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GFRA1P56159 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GFRA1P56159 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GFRA1P56159 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GFRA1P56159 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
GFRA1P56159 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GFRA1P56159 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GFRA1P56159 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.55□□□□□ -0.08
GFRA1P56159 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GFRA1P56159 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GFRA1P56159 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.55□□□□□ -0.08
GFRA1P56159 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GFRA1P56159 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
GFRA1P56159 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.55□□□□□ -0.08
GFRA1P56159 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.55□□□□□ -0.08
GFRA1P56159 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.55□□□□□ -0.08
GFRA1P56159 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GFRA1P56159 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.55□□□□□ -0.08
GFRA1P56159 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GFRA1P56159 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.55□□□□□ -0.08
GFRA1P56159 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.55□□□□□ -0.08
GFRA1P56159 AC092364.2-202ENST00000597012 1073 ntBASIC14.55□□□□□ -0.08
GFRA1P56159 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.55□□□□□ -0.08
GFRA1P56159 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
GFRA1P56159 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.55□□□□□ -0.08
GFRA1P56159 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GFRA1P56159 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GFRA1P56159 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GFRA1P56159 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.55□□□□□ -0.08
GFRA1P56159 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
GFRA1P56159 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms