Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH12P55289 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH12P55289 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH12P55289 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH12P55289 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH12P55289 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH12P55289 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CDH12P55289 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH12P55289 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH12P55289 EMBP1-201ENST00000458200 901 ntBASIC15.27■□□□□ 0.04
CDH12P55289 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CDH12P55289 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH12P55289 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH12P55289 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.27■□□□□ 0.04
CDH12P55289 AC008735.5-201ENST00000623544 497 ntBASIC15.27■□□□□ 0.04
CDH12P55289 TP73-AS1-207ENST00000624167 988 ntBASIC15.27■□□□□ 0.04
CDH12P55289 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH12P55289 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CDH12P55289 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH12P55289 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.27■□□□□ 0.03
CDH12P55289 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CDH12P55289 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
CDH12P55289 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.27■□□□□ 0.03
CDH12P55289 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH12P55289 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.27■□□□□ 0.03
CDH12P55289 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH12P55289 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDH12P55289 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH12P55289 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDH12P55289 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH12P55289 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH12P55289 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDH12P55289 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH12P55289 HNRNPDP1-201ENST00000439535 754 ntBASIC15.26■□□□□ 0.03
CDH12P55289 DUSP5P1-201ENST00000441325 1139 ntBASIC15.26■□□□□ 0.03
CDH12P55289 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH12P55289 FAM197Y8-203ENST00000450145 560 ntBASIC15.26■□□□□ 0.03
CDH12P55289 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH12P55289 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH12P55289 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH12P55289 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.26■□□□□ 0.03
CDH12P55289 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.26■□□□□ 0.03
CDH12P55289 AC008667.4-201ENST00000607370 168 ntBASIC15.26■□□□□ 0.03
CDH12P55289 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.26■□□□□ 0.03
CDH12P55289 AC010654.1-201ENST00000615722 808 ntBASIC15.26■□□□□ 0.03
CDH12P55289 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH12P55289 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH12P55289 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CDH12P55289 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH12P55289 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDH12P55289 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH12P55289 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDH12P55289 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH12P55289 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CDH12P55289 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH12P55289 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
CDH12P55289 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH12P55289 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH12P55289 AC129492.6-201ENST00000611383 1305 ntBASIC15.25■□□□□ 0.03
CDH12P55289 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CDH12P55289 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
CDH12P55289 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH12P55289 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.25■□□□□ 0.03
CDH12P55289 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH12P55289 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH12P55289 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH12P55289 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CDH12P55289 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH12P55289 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CDH12P55289 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH12P55289 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH12P55289 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH12P55289 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH12P55289 AL356488.2-201ENST00000602755 427 ntBASIC15.25■□□□□ 0.03
CDH12P55289 AL121912.1-201ENST00000603683 238 ntBASIC15.25■□□□□ 0.03
CDH12P55289 MIR1199-201ENST00000621445 119 ntBASIC15.25■□□□□ 0.03
CDH12P55289 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms