Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.81■□□□□ 0.44
NCKAP1LP55160 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.81■□□□□ 0.44
NCKAP1LP55160 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.81■□□□□ 0.44
NCKAP1LP55160 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.81■□□□□ 0.44
NCKAP1LP55160 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCKAP1LP55160 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCKAP1LP55160 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCKAP1LP55160 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
NCKAP1LP55160 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCKAP1LP55160 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCKAP1LP55160 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCKAP1LP55160 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCKAP1LP55160 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.81■□□□□ 0.44
NCKAP1LP55160 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NCKAP1LP55160 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
NCKAP1LP55160 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCKAP1LP55160 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCKAP1LP55160 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.81■□□□□ 0.44
NCKAP1LP55160 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.81■□□□□ 0.44
NCKAP1LP55160 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCKAP1LP55160 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
NCKAP1LP55160 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCKAP1LP55160 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.81■□□□□ 0.44
NCKAP1LP55160 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.8■□□□□ 0.44
NCKAP1LP55160 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NCKAP1LP55160 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCKAP1LP55160 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NCKAP1LP55160 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCKAP1LP55160 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NCKAP1LP55160 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.8■□□□□ 0.44
NCKAP1LP55160 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCKAP1LP55160 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCKAP1LP55160 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NCKAP1LP55160 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
NCKAP1LP55160 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCKAP1LP55160 HAUS4P1-201ENST00000406739 1145 ntBASIC17.8■□□□□ 0.44
NCKAP1LP55160 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NCKAP1LP55160 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.8■□□□□ 0.44
NCKAP1LP55160 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCKAP1LP55160 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.8■□□□□ 0.44
NCKAP1LP55160 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.8■□□□□ 0.44
NCKAP1LP55160 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.8■□□□□ 0.44
NCKAP1LP55160 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.8■□□□□ 0.44
NCKAP1LP55160 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.8■□□□□ 0.44
NCKAP1LP55160 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.8■□□□□ 0.44
NCKAP1LP55160 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.8■□□□□ 0.44
NCKAP1LP55160 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NCKAP1LP55160 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NCKAP1LP55160 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCKAP1LP55160 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NCKAP1LP55160 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCKAP1LP55160 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.8■□□□□ 0.44
NCKAP1LP55160 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCKAP1LP55160 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCKAP1LP55160 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCKAP1LP55160 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCKAP1LP55160 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCKAP1LP55160 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.8■□□□□ 0.44
NCKAP1LP55160 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NCKAP1LP55160 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.8■□□□□ 0.44
NCKAP1LP55160 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NCKAP1LP55160 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCKAP1LP55160 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCKAP1LP55160 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
NCKAP1LP55160 AL035456.1-201ENST00000456064 1369 ntBASIC17.79■□□□□ 0.44
NCKAP1LP55160 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.79■□□□□ 0.44
NCKAP1LP55160 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.79■□□□□ 0.44
NCKAP1LP55160 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCKAP1LP55160 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NCKAP1LP55160 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCKAP1LP55160 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCKAP1LP55160 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCKAP1LP55160 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NCKAP1LP55160 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NCKAP1LP55160 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NCKAP1LP55160 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.79■□□□□ 0.44
NCKAP1LP55160 AL645939.2-201ENST00000427340 991 ntBASIC17.79■□□□□ 0.44
NCKAP1LP55160 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCKAP1LP55160 AL139010.1-201ENST00000454878 894 ntBASIC17.79■□□□□ 0.44
NCKAP1LP55160 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.79■□□□□ 0.44
NCKAP1LP55160 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCKAP1LP55160 AL133215.2-201ENST00000609242 977 ntBASIC17.79■□□□□ 0.44
NCKAP1LP55160 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCKAP1LP55160 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NCKAP1LP55160 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
NCKAP1LP55160 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.79■□□□□ 0.44
NCKAP1LP55160 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCKAP1LP55160 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NCKAP1LP55160 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
NCKAP1LP55160 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.79■□□□□ 0.44
NCKAP1LP55160 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCKAP1LP55160 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCKAP1LP55160 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCKAP1LP55160 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
NCKAP1LP55160 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCKAP1LP55160 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NCKAP1LP55160 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCKAP1LP55160 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCKAP1LP55160 AL136982.4-201ENST00000437689 1740 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms