Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
APOC4P55056 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
APOC4P55056 BCRP1-201ENST00000444246 691 ntBASIC11.95□□□□□ -0.5
APOC4P55056 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
APOC4P55056 LY6E-204ENST00000519546 971 ntTSL 2 BASIC11.95□□□□□ -0.5
APOC4P55056 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC4P55056 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC11.95□□□□□ -0.5
APOC4P55056 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC11.95□□□□□ -0.5
APOC4P55056 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC4P55056 NAA60-208ENST00000570819 833 ntTSL 2 BASIC11.95□□□□□ -0.5
APOC4P55056 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC11.95□□□□□ -0.5
APOC4P55056 AL589739.1-201ENST00000607720 493 ntBASIC11.95□□□□□ -0.5
APOC4P55056 RAB34-223ENST00000636154 730 ntTSL 2 BASIC11.95□□□□□ -0.5
APOC4P55056 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
APOC4P55056 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
APOC4P55056 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC4P55056 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
APOC4P55056 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC11.95□□□□□ -0.5
APOC4P55056 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC4P55056 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC4P55056 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC4P55056 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC4P55056 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC4P55056 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC11.95□□□□□ -0.5
APOC4P55056 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC4P55056 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC4P55056 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
APOC4P55056 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
APOC4P55056 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC11.94□□□□□ -0.5
APOC4P55056 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 AC005622.1-201ENST00000636801 1703 ntBASIC11.94□□□□□ -0.5
APOC4P55056 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
APOC4P55056 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC11.94□□□□□ -0.5
APOC4P55056 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC11.94□□□□□ -0.5
APOC4P55056 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC11.94□□□□□ -0.5
APOC4P55056 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
APOC4P55056 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
APOC4P55056 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
APOC4P55056 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
APOC4P55056 HLA-A-202ENST00000376806 1854 ntBASIC11.94□□□□□ -0.5
APOC4P55056 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC11.94□□□□□ -0.5
APOC4P55056 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC11.94□□□□□ -0.5
APOC4P55056 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
APOC4P55056 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
APOC4P55056 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 SERBP1P3-201ENST00000459980 809 ntBASIC11.94□□□□□ -0.5
APOC4P55056 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC11.94□□□□□ -0.5
APOC4P55056 AC097493.3-201ENST00000509725 367 ntBASIC11.94□□□□□ -0.5
APOC4P55056 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC11.94□□□□□ -0.5
APOC4P55056 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC11.94□□□□□ -0.5
APOC4P55056 GREM1-201ENST00000560677 623 ntTSL 4 BASIC11.94□□□□□ -0.5
APOC4P55056 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC11.94□□□□□ -0.5
APOC4P55056 AC105021.1-202ENST00000570572 669 ntBASIC11.94□□□□□ -0.5
APOC4P55056 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC11.94□□□□□ -0.5
APOC4P55056 GPER1-207ENST00000619052 571 ntTSL 2 BASIC11.94□□□□□ -0.5
APOC4P55056 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC11.94□□□□□ -0.5
APOC4P55056 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
APOC4P55056 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC11.94□□□□□ -0.5
APOC4P55056 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
APOC4P55056 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC11.94□□□□□ -0.5
APOC4P55056 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC11.94□□□□□ -0.5
APOC4P55056 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC11.94□□□□□ -0.5
APOC4P55056 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
APOC4P55056 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
APOC4P55056 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC11.94□□□□□ -0.5
APOC4P55056 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC11.94□□□□□ -0.5
APOC4P55056 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC11.94□□□□□ -0.5
APOC4P55056 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC4P55056 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC11.93□□□□□ -0.5
APOC4P55056 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC11.93□□□□□ -0.5
APOC4P55056 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC4P55056 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
APOC4P55056 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC11.93□□□□□ -0.5
APOC4P55056 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC4P55056 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC4P55056 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC4P55056 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
APOC4P55056 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms