Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.89■□□□□ 0.77
PDE1AP54750 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDE1AP54750 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
PDE1AP54750 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDE1AP54750 AC105339.1-204ENST00000636249 355 ntBASIC19.89■□□□□ 0.77
PDE1AP54750 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.89■□□□□ 0.77
PDE1AP54750 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDE1AP54750 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDE1AP54750 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PDE1AP54750 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PDE1AP54750 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.88■□□□□ 0.77
PDE1AP54750 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDE1AP54750 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.88■□□□□ 0.77
PDE1AP54750 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.88■□□□□ 0.77
PDE1AP54750 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDE1AP54750 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDE1AP54750 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.88■□□□□ 0.77
PDE1AP54750 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDE1AP54750 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDE1AP54750 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDE1AP54750 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PDE1AP54750 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.88■□□□□ 0.77
PDE1AP54750 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.88■□□□□ 0.77
PDE1AP54750 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
PDE1AP54750 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDE1AP54750 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDE1AP54750 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.88■□□□□ 0.77
PDE1AP54750 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.88■□□□□ 0.77
PDE1AP54750 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.88■□□□□ 0.77
PDE1AP54750 AC112482.1-201ENST00000492080 688 ntBASIC19.88■□□□□ 0.77
PDE1AP54750 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDE1AP54750 MIR4469-201ENST00000583919 79 ntBASIC19.88■□□□□ 0.77
PDE1AP54750 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.88■□□□□ 0.77
PDE1AP54750 AC022145.2-201ENST00000598203 171 ntBASIC19.88■□□□□ 0.77
PDE1AP54750 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.88■□□□□ 0.77
PDE1AP54750 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PDE1AP54750 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDE1AP54750 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PDE1AP54750 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.88■□□□□ 0.77
PDE1AP54750 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PDE1AP54750 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDE1AP54750 AP005117.1-202ENST00000581724 1908 ntBASIC19.88■□□□□ 0.77
PDE1AP54750 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDE1AP54750 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
PDE1AP54750 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PDE1AP54750 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.88■□□□□ 0.77
PDE1AP54750 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE1AP54750 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE1AP54750 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE1AP54750 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PDE1AP54750 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PDE1AP54750 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE1AP54750 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDE1AP54750 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PDE1AP54750 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE1AP54750 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE1AP54750 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.87■□□□□ 0.77
PDE1AP54750 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.87■□□□□ 0.77
PDE1AP54750 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDE1AP54750 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.87■□□□□ 0.77
PDE1AP54750 RPSAP43-201ENST00000402237 625 ntBASIC19.87■□□□□ 0.77
PDE1AP54750 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.87■□□□□ 0.77
PDE1AP54750 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.87■□□□□ 0.77
PDE1AP54750 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.87■□□□□ 0.77
PDE1AP54750 KRT8P23-201ENST00000560090 1207 ntBASIC19.87■□□□□ 0.77
PDE1AP54750 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.87■□□□□ 0.77
PDE1AP54750 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.87■□□□□ 0.77
PDE1AP54750 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE1AP54750 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PDE1AP54750 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PDE1AP54750 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE1AP54750 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.87■□□□□ 0.77
PDE1AP54750 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PDE1AP54750 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.87■□□□□ 0.77
PDE1AP54750 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE1AP54750 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDE1AP54750 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE1AP54750 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE1AP54750 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE1AP54750 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE1AP54750 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.87■□□□□ 0.77
PDE1AP54750 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDE1AP54750 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.87■□□□□ 0.77
PDE1AP54750 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDE1AP54750 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE1AP54750 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDE1AP54750 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE1AP54750 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.86■□□□□ 0.77
PDE1AP54750 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
PDE1AP54750 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.86■□□□□ 0.77
PDE1AP54750 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.86■□□□□ 0.77
PDE1AP54750 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE1AP54750 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.86■□□□□ 0.77
PDE1AP54750 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDE1AP54750 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.86■□□□□ 0.77
PDE1AP54750 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDE1AP54750 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE1AP54750 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDE1AP54750 FAM220BP-201ENST00000377689 816 ntBASIC19.86■□□□□ 0.77
PDE1AP54750 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms